RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 ACRBPQ8NEB7 543 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 CCDC102AQ96A19 550 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 L1RE1Q9UN81 338 aa15.92■□□□□ 0.14
APOB-202ENST00000399256 CYP27B1O15528 508 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 USP5P45974 858 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 SSRP1Q08945 709 aaKnown RBP15.91■□□□□ 0.14
APOB-202ENST00000399256 DIS3L2Q8IYB7 885 aaKnown RBP15.91■□□□□ 0.14
APOB-202ENST00000399256 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 ECM29Q5VYK3 1845 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 CTAGE9A4FU28 777 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 IQUBQ8NA54 791 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
APOB-202ENST00000399256 A1BGP04217 495 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 PTPREP23469 700 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 CASP1P29466 404 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 CASP14P31944 242 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 APTXQ7Z2E3 356 aaKnown RBP15.9■□□□□ 0.14
APOB-202ENST00000399256 DCAF5Q96JK2 942 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 LY9Q9HBG7 655 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 AKAP2Q9Y2D5 859 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 RGS22Q8NE09 1264 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 ACTN4O43707 911 aaKnown RBP15.9■□□□□ 0.14
APOB-202ENST00000399256 COBLO75128 1261 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 AFMP43652 599 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 PIP4K2BP78356 416 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 CASP8Q14790 479 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 TAF7LQ5H9L4 462 aa15.9■□□□□ 0.14
APOB-202ENST00000399256 ELOA2Q8IYF1 753 aaPredicted RBP15.9■□□□□ 0.14
APOB-202ENST00000399256 COL5A2P05997 1499 aaPredicted RBP15.89■□□□□ 0.13
APOB-202ENST00000399256 MFAP3LO75121 409 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 IVLP07476 585 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
APOB-202ENST00000399256 NR5A1Q13285 461 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 SAFBQ15424 915 aaKnown RBP eCLIP15.89■□□□□ 0.13
APOB-202ENST00000399256 SMYD4Q8IYR2 804 aaPredicted RBP15.89■□□□□ 0.13
APOB-202ENST00000399256 CMTR1Q8N1G2 835 aaKnown RBP15.89■□□□□ 0.13
APOB-202ENST00000399256 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 IDH1O75874 414 aaKnown RBP15.89■□□□□ 0.13
APOB-202ENST00000399256 MMP1P03956 469 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 MCAMP43121 646 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 RASGRP2Q7LDG7 609 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 CERS3Q8IU89 383 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 TRIML1Q8N9V2 468 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 NAA15Q9BXJ9 866 aaKnown RBP15.89■□□□□ 0.13
APOB-202ENST00000399256 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.89■□□□□ 0.13
APOB-202ENST00000399256 CSRNP2Q9H175 543 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 SLC12A7Q9Y666 1083 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 TJP1Q07157 1748 aa15.89■□□□□ 0.13
APOB-202ENST00000399256 CTAGE15A4D2H0 777 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 CTAGE8P0CG41 777 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 FXR1P51114 621 aaKnown RBP eCLIP15.88■□□□□ 0.13
APOB-202ENST00000399256 CTAGE6Q86UF2 777 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 CTAGE4Q8IX94 777 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 NOA1Q8NC60 698 aaKnown RBP15.88■□□□□ 0.13
APOB-202ENST00000399256 PLEKHA4Q9H4M7 779 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 UBAP1LF5GYI3 381 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 IFIT3O14879 490 aaKnown RBP15.88■□□□□ 0.13
APOB-202ENST00000399256 FMNL1O95466 1100 aaPredicted RBP15.88■□□□□ 0.13
APOB-202ENST00000399256 ERCC5P28715 1186 aaPredicted RBP15.88■□□□□ 0.13
APOB-202ENST00000399256 ADD2P35612 726 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 HSP90B2PQ58FF3 399 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 TMEM87BQ96K49 555 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
APOB-202ENST00000399256 ANKRD65E5RJM6 399 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 SPATA1Q5VX52 437 aa15.88■□□□□ 0.13
APOB-202ENST00000399256 NAPGQ99747 312 aaPredicted RBP15.88■□□□□ 0.13
APOB-202ENST00000399256 ADD3Q9UEY8 706 aaKnown RBP15.88■□□□□ 0.13
APOB-202ENST00000399256 LRRIQ3A6PVS8 624 aaPredicted RBP15.87■□□□□ 0.13
APOB-202ENST00000399256 GYPCP04921 128 aa15.87■□□□□ 0.13
APOB-202ENST00000399256 CCT6AP40227 531 aaKnown RBP15.87■□□□□ 0.13
APOB-202ENST00000399256 CTDSPL2Q05D32 466 aa15.87■□□□□ 0.13
APOB-202ENST00000399256 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
APOB-202ENST00000399256 ZNF330Q9Y3S2 320 aaPredicted RBP15.87■□□□□ 0.13
APOB-202ENST00000399256 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
APOB-202ENST00000399256 MAP3K15Q6ZN16 1313 aa15.87■□□□□ 0.13
APOB-202ENST00000399256 PBX1P40424 430 aa15.87■□□□□ 0.13
APOB-202ENST00000399256 OXER1Q8TDS5 423 aa15.87■□□□□ 0.13
APOB-202ENST00000399256 PIH1D3Q9NQM4 214 aaKnown RBP15.87■□□□□ 0.13
APOB-202ENST00000399256 NOP2P46087 812 aaKnown RBP15.86■□□□□ 0.13
APOB-202ENST00000399256 RILPL1Q5EBL4 403 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 ZKSCAN3Q9BRR0 538 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 WDR17Q8IZU2 1322 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 ZNF532Q9HCE3 1301 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 A0A087X0B3 334 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 CDC25AP30304 524 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 ERVK-24P63145 666 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 EFCC1Q9HA90 598 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 ZSWIM5Q9P217 1185 aa15.86■□□□□ 0.13
APOB-202ENST00000399256 SRPRBQ9Y5M8 271 aaKnown RBP15.86■□□□□ 0.13
APOB-202ENST00000399256 SGMS1Q86VZ5 419 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 SPATA20Q8TB22 786 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 FAM71BQ8TC56 605 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 FAM204AQ9H8W3 233 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 CABP5Q9NP86 173 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 TTF2Q9UNY4 1162 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms