RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 USP28Q96RU2 1077 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 COL4A5P29400 1685 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 ZBTB43O43298 467 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 PPIP5K2O43314 1243 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 USP17L8P0C7I0 530 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 CEBPZQ03701 1054 aaKnown RBP10.99□□□□□ -0.65
LINC00243-201ENST00000399196 WTAPQ15007 396 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 SBK1Q52WX2 424 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 MAPKAPK5Q8IW41 473 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 CERS5Q8N5B7 392 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 FBXO18Q8NFZ0 1043 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
LINC00243-201ENST00000399196 SPATA32Q96LK8 384 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 ZSCAN16Q9H4T2 348 aaPredicted RBP10.99□□□□□ -0.65
LINC00243-201ENST00000399196 BCS1LQ9Y276 419 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00243-201ENST00000399196 SLC12A7Q9Y666 1083 aa10.99□□□□□ -0.65
LINC00243-201ENST00000399196 ARFGEF1Q9Y6D6 1849 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 FER1L6Q2WGJ9 1857 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 GOLGA8AA7E2F4 631 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 POLR3DP05423 398 aaPredicted RBP10.98□□□□□ -0.65
LINC00243-201ENST00000399196 SCNN1DP51172 638 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 KIAA2012Q0VF49 1180 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 STRIP1Q5VSL9 837 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 IQCA1Q86XH1 822 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 CMTR1Q8N1G2 835 aaKnown RBP10.98□□□□□ -0.65
LINC00243-201ENST00000399196 TMTC2Q8N394 836 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 DAGLAQ9Y4D2 1042 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 GAKO14976 1311 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 MYH6P13533 1939 aa10.98□□□□□ -0.65
LINC00243-201ENST00000399196 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 NMT2O60551 498 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 CPLX2Q6PUV4 134 aaKnown RBP10.97□□□□□ -0.65
LINC00243-201ENST00000399196 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 ENAHQ8N8S7 591 aaPredicted RBP10.97□□□□□ -0.65
LINC00243-201ENST00000399196 TEKT1Q969V4 418 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 C8orf76Q96K31 380 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 SCAND2PQ9GZW5 306 aaPredicted RBP10.97□□□□□ -0.65
LINC00243-201ENST00000399196 KCNQ5Q9NR82 932 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 SAP30BPQ9UHR5 308 aaKnown RBP10.97□□□□□ -0.65
LINC00243-201ENST00000399196 TNKSO95271 1327 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 NID2Q14112 1375 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 CCDC183Q5T5S1 534 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 SOGA3Q5TF21 947 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 C12orf60Q5U649 245 aa10.97□□□□□ -0.65
LINC00243-201ENST00000399196 NFKBIEO00221 500 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 ORC4O43929 436 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 CDKL5O76039 1030 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 NASPP49321 788 aaPredicted RBP10.96□□□□□ -0.65
LINC00243-201ENST00000399196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00243-201ENST00000399196 NBPF11Q86T75 865 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 KIAA0825Q8IV33 1275 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 ZNF654Q8IZM8 581 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 SHISA4Q96DD7 197 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 ZSCAN10Q96SZ4 725 aaPredicted RBP10.96□□□□□ -0.65
LINC00243-201ENST00000399196 FUCA2Q9BTY2 467 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 MKNK2Q9HBH9 465 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 RCOR1Q9UKL0 485 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 NAV1Q8NEY1 1877 aa10.96□□□□□ -0.65
LINC00243-201ENST00000399196 FLT1P17948 1338 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 TSPY2A6NKD2 308 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 PRELPP51888 382 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 RBM5P52756 815 aaKnown RBP eCLIP10.96□□□□□ -0.66
LINC00243-201ENST00000399196 RHBDL3P58872 404 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 FKBP1AP62942 108 aaKnown RBP10.96□□□□□ -0.66
LINC00243-201ENST00000399196 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.66
LINC00243-201ENST00000399196 PICALMQ13492 652 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 CSPP1Q1MSJ5 1256 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 FAM47AQ5JRC9 791 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 IFIT1BQ5T764 474 aaKnown RBP10.96□□□□□ -0.66
LINC00243-201ENST00000399196 HHIPL2Q6UWX4 724 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 LARGE2Q8N3Y3 721 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 RNF214Q8ND24 703 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 DYNLL2Q96FJ2 89 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 PSMD1Q99460 953 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 ALG1Q9BT22 464 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 ZNF287Q9HBT7 754 aa10.96□□□□□ -0.66
LINC00243-201ENST00000399196 ZNF646O15015 1829 aaPredicted RBP10.96□□□□□ -0.66
LINC00243-201ENST00000399196 SCN9AQ15858 1988 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 DDX60LQ5H9U9 1706 aaKnown RBP10.95□□□□□ -0.66
LINC00243-201ENST00000399196 NR1I2O75469 434 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 IFNAR1P17181 557 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 KRT40Q6A162 431 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 CCDC82Q8N4S0 544 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 NUP133Q8WUM0 1156 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
LINC00243-201ENST00000399196 ZNF277Q9NRM2 450 aaPredicted RBP10.95□□□□□ -0.66
LINC00243-201ENST00000399196 USP40Q9NVE5 1235 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 CLIC4Q9Y696 253 aa10.95□□□□□ -0.66
LINC00243-201ENST00000399196 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC00243-201ENST00000399196 IARSP41252 1262 aaKnown RBP10.94□□□□□ -0.66
LINC00243-201ENST00000399196 CRKP46108 304 aa10.94□□□□□ -0.66
LINC00243-201ENST00000399196 RASSF7Q02833 373 aa10.94□□□□□ -0.66
LINC00243-201ENST00000399196 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms