RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 TRIML1Q8N9V2 468 aa13.06□□□□□ -0.32
C4orf3-201ENST00000399075 MIGA1Q8NAN2 632 aa13.06□□□□□ -0.32
C4orf3-201ENST00000399075 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
C4orf3-201ENST00000399075 SRPRBQ9Y5M8 271 aaKnown RBP13.06□□□□□ -0.32
C4orf3-201ENST00000399075 CASZ1Q86V15 1759 aa13.06□□□□□ -0.32
C4orf3-201ENST00000399075 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 ZSCAN20P17040 1043 aaPredicted RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 SF3B3Q15393 1217 aaKnown RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 FOXP4Q8IVH2 680 aaPredicted RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 CGNQ9P2M7 1197 aaKnown RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 COL1A1P02452 1464 aaPredicted RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 UBASH3AP57075 661 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 VSTM4Q8IW00 320 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 ZNF592Q92610 1267 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 FEZ1Q99689 392 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 RIOK1Q9BRS2 568 aaKnown RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 FGRP09769 529 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 SARSP49591 514 aaKnown RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 POSTNQ15063 836 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 ADGRA1Q86SQ6 560 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
C4orf3-201ENST00000399075 TRMT1Q9NXH9 659 aaKnown RBP13.05□□□□□ -0.32
C4orf3-201ENST00000399075 TNKSO95271 1327 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 XBP1P17861 261 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 ISM2Q6H9L7 571 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
C4orf3-201ENST00000399075 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 BSDC1Q9NW68 430 aaPredicted RBP13.04□□□□□ -0.32
C4orf3-201ENST00000399075 PDS5AQ29RF7 1337 aaKnown RBP13.04□□□□□ -0.32
C4orf3-201ENST00000399075 SERPINC1P01008 464 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 BMP6P22004 513 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 FCHSD1Q86WN1 690 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 L2HGDHQ9H9P8 463 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 MAN1B1Q9UKM7 699 aa13.04□□□□□ -0.32
C4orf3-201ENST00000399075 SEMA3EO15041 775 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
C4orf3-201ENST00000399075 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
C4orf3-201ENST00000399075 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
C4orf3-201ENST00000399075 RAI14Q9P0K7 980 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 PRPF3O43395 683 aaKnown RBP13.03□□□□□ -0.32
C4orf3-201ENST00000399075 IGSF3O75054 1194 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 BMP15O95972 392 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 CALM1P0DP23 149 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 CALM2P0DP24 149 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 CALM3P0DP25 149 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 FUT2Q10981 343 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 NR5A1Q13285 461 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 MORC3Q14149 939 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 TMED8Q6PL24 325 aaPredicted RBP13.03□□□□□ -0.32
C4orf3-201ENST00000399075 SPATA20Q8TB22 786 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
C4orf3-201ENST00000399075 ACTN4O43707 911 aaKnown RBP13.02□□□□□ -0.32
C4orf3-201ENST00000399075 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.32
C4orf3-201ENST00000399075 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.32
C4orf3-201ENST00000399075 CFAP100Q494V2 611 aa13.02□□□□□ -0.32
C4orf3-201ENST00000399075 CAVIN4Q5BKX8 364 aa13.02□□□□□ -0.32
C4orf3-201ENST00000399075 ENAHQ8N8S7 591 aaPredicted RBP13.02□□□□□ -0.32
C4orf3-201ENST00000399075 ENOX1Q8TC92 643 aaKnown RBP13.02□□□□□ -0.32
C4orf3-201ENST00000399075 SDR42E1Q8WUS8 393 aa13.02□□□□□ -0.32
C4orf3-201ENST00000399075 DPF2Q92785 391 aa13.02□□□□□ -0.32
C4orf3-201ENST00000399075 FANCLQ9NW38 375 aa13.02□□□□□ -0.32
C4orf3-201ENST00000399075 AATFQ9NY61 560 aaKnown RBP eCLIP13.02□□□□□ -0.32
C4orf3-201ENST00000399075 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.32
C4orf3-201ENST00000399075 MINDY4BA8MYZ0 360 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
C4orf3-201ENST00000399075 ZNF18P17022 549 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 UTP14CQ5TAP6 766 aaKnown RBP13.02□□□□□ -0.33
C4orf3-201ENST00000399075 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 ACSBG1Q96GR2 724 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 CCDC34Q96HJ3 373 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 PHF20Q9BVI0 1012 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 ABCF2Q9UG63 623 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 LAMB1P07942 1786 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 TRIM75PA6NK02 468 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 DDAH1O94760 285 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 SLU7O95391 586 aaKnown RBP13.02□□□□□ -0.33
C4orf3-201ENST00000399075 GYG1P46976 350 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 GRIN1Q05586 938 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 PDE4BQ07343 736 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 PKN1Q16512 942 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 SERTAD1Q9UHV2 236 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 ZNF215Q9UL58 517 aaPredicted RBP13.02□□□□□ -0.33
C4orf3-201ENST00000399075 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.33
C4orf3-201ENST00000399075 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 FOXN1O15353 648 aa13.01□□□□□ -0.33
C4orf3-201ENST00000399075 TOP1P11387 765 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms