RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 LETM2Q2VYF4 491 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ZNF365Q70YC5 407 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 VPS52Q8N1B4 723 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 MIGA1Q8NAN2 632 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 TBC1D22AQ8WUA7 517 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 RBSNQ9H1K0 784 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ZFYVE16Q7Z3T8 1539 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 P4HA1P13674 534 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 GJC1P36383 396 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 VCX3BQ9H321 246 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 ATP7BP35670 1465 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 E7EVH7 732 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 PIK3AP1Q6ZUJ8 805 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 NELFBQ8WX92 580 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 RAB3IPQ96QF0 476 aaPredicted RBP9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 FAM114A2Q9NRY5 505 aa9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.3□□□□□ -0.92
SPTLC3-201ENST00000399002 GOLGA6BA6NDN3 693 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 ZNF202O95125 648 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 ZWINTO95229 277 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 CEP85LQ5SZL2 805 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 JARID2Q92833 1246 aaPredicted RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 LRRC59Q96AG4 307 aaKnown RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 TCEANC2Q96MN5 208 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 DNM3Q9UQ16 869 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 SH3TC1Q8TE82 1336 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 MLH3Q9UHC1 1453 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 ARHGEF35A5YM69 484 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 DDAH1O94760 285 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 GCP02774 474 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 PDE6BP35913 854 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 NT5C2P49902 561 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 SH2D4BQ5SQS7 431 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 ZMYM6O95789 1325 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 RASSF2P50749 326 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 GCKRQ14397 625 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 CALCRLQ16602 461 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 PPP1R2P3Q6NXS1 205 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 CCDC62Q6P9F0 684 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 PHLDB2Q86SQ0 1253 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 TEKT1Q969V4 418 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 PPP1R9BQ96SB3 815 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 ZHX1Q9UKY1 873 aaPredicted RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 ATP10DQ9P241 1426 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 I3L4J1 428 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 GPAA1O43292 621 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 SLC4A8Q2Y0W8 1093 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 MAP3K21Q5TCX8 1036 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 ADALQ6DHV7 355 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 TRIM58Q8NG06 486 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 JDP2Q8WYK2 163 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 PER1O15534 1290 aaPredicted RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 CRCPO75575 148 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 PSMC4P43686 418 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 CEBPAP49715 358 aaPredicted RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 BRDTQ58F21 947 aaPredicted RBP9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 CABP7Q86V35 215 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 SLFN12Q8IYM2 578 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 SPATA5Q8NB90 893 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 BBOF1Q8ND07 529 aa9.29□□□□□ -0.92
SPTLC3-201ENST00000399002 MED23Q9ULK4 1368 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 SBNO2Q9Y2G9 1366 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 B4E1Z4 1266 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 ERVV-2B6SEH9 535 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 ZBED4O75132 1171 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 ABCD1P33897 745 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 GTF3C6Q969F1 213 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 PICK1Q9NRD5 415 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 MAP3K19Q56UN5 1328 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 PTPRTO14522 1441 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 LAD1O00515 517 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 ZEB2O60315 1214 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 MIS12Q9H081 205 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 NEDD9Q14511 834 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 DIS3L2Q8IYB7 885 aaKnown RBP9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 CNBD1Q8NA66 436 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 SMC1BQ8NDV3 1235 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 EIF3CLB5ME19 914 aaKnown RBP9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 KIF3CO14782 793 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 INPP5BP32019 993 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 PHBP35232 272 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 CCDC25Q86WR0 208 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 EIF3CQ99613 913 aaKnown RBP9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 ATP8A2Q9NTI2 1148 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 ZNF219Q9P2Y4 722 aaPredicted RBP9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 LRWD1Q9UFC0 647 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 AATKQ6ZMQ8 1374 aa9.28□□□□□ -0.92
SPTLC3-201ENST00000399002 POLR2DO15514 142 aaKnown RBP9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 BRD1O95696 1058 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 VIMP08670 466 aaKnown RBP9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 PPM1FP49593 454 aaPredicted RBP9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 RPS6KA1Q15418 735 aa9.27□□□□□ -0.92
SPTLC3-201ENST00000399002 HSP90AA4PQ58FG1 418 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms