RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 BAG1Q99933 345 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-205ENST00000398978 MROH5Q6ZUA9 1318 aa22.36■■□□□ 1.17
COL13A1-205ENST00000398978 GNG11P61952 73 aa22.35■■□□□ 1.17
COL13A1-205ENST00000398978 ALX1Q15699 326 aa22.35■■□□□ 1.17
COL13A1-205ENST00000398978 SLIT2O94813 1529 aa22.35■■□□□ 1.17
COL13A1-205ENST00000398978 TEX33O43247 280 aa22.35■■□□□ 1.17
COL13A1-205ENST00000398978 UBAC1Q9BSL1 405 aa22.35■■□□□ 1.17
COL13A1-205ENST00000398978 GYG1P46976 350 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 SART3Q15020 963 aaKnown RBP22.34■■□□□ 1.17
COL13A1-205ENST00000398978 UBXN4Q92575 508 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 ZSWIM4Q9H7M6 989 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 PPARAQ07869 468 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 ZNF34Q8IZ26 560 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 TC2NQ8N9U0 490 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 NACAP1Q9BZK3 213 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 CNNM2Q9H8M5 875 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 RAI14Q9P0K7 980 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 ERICH4A6NGS2 130 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 DYNLL1P63167 89 aaKnown RBP22.34■■□□□ 1.17
COL13A1-205ENST00000398978 CREBRFQ8IUR6 639 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 TNKSO95271 1327 aa22.34■■□□□ 1.17
COL13A1-205ENST00000398978 ZNF335Q9H4Z2 1342 aaPredicted RBP22.34■■□□□ 1.17
COL13A1-205ENST00000398978 MYH3P11055 1940 aa22.33■■□□□ 1.17
COL13A1-205ENST00000398978 PLEKHA8P1O95397 391 aa22.33■■□□□ 1.17
COL13A1-205ENST00000398978 H2AFXP16104 143 aaPredicted RBP22.33■■□□□ 1.17
COL13A1-205ENST00000398978 PARP3Q9Y6F1 533 aa22.33■■□□□ 1.17
COL13A1-205ENST00000398978 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.33■■□□□ 1.17
COL13A1-205ENST00000398978 DEXIO95424 95 aa22.33■■□□□ 1.16
COL13A1-205ENST00000398978 STAG1Q8WVM7 1258 aa22.33■■□□□ 1.16
COL13A1-205ENST00000398978 ACTN4O43707 911 aaKnown RBP22.32■■□□□ 1.16
COL13A1-205ENST00000398978 ZNF174Q15697 407 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 RILPL1Q5EBL4 403 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 SMIM5Q71RC9 77 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 WASF1Q92558 559 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 STK36Q9NRP7 1315 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 CD44P16070 742 aaKnown RBP22.32■■□□□ 1.16
COL13A1-205ENST00000398978 V9GY48 417 aaPredicted RBP22.32■■□□□ 1.16
COL13A1-205ENST00000398978 NUP98P52948 1817 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 CHRNDQ07001 517 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 MORC3Q14149 939 aa22.32■■□□□ 1.16
COL13A1-205ENST00000398978 SOWAHDA6NJG2 315 aa22.31■■□□□ 1.16
COL13A1-205ENST00000398978 KCNJ6P48051 423 aa22.31■■□□□ 1.16
COL13A1-205ENST00000398978 TERF2Q15554 542 aa22.31■■□□□ 1.16
COL13A1-205ENST00000398978 SPECC1LQ69YQ0 1117 aa22.31■■□□□ 1.16
COL13A1-205ENST00000398978 FOXP1Q9H334 677 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-205ENST00000398978 FHOD1Q9Y613 1164 aa22.31■■□□□ 1.16
COL13A1-205ENST00000398978 CHD4Q14839 1912 aa22.31■■□□□ 1.16
COL13A1-205ENST00000398978 ARHGAP6O43182 974 aa22.3■■□□□ 1.16
COL13A1-205ENST00000398978 ZNF18P17022 549 aa22.3■■□□□ 1.16
COL13A1-205ENST00000398978 LZTFL1Q9NQ48 299 aa22.3■■□□□ 1.16
COL13A1-205ENST00000398978 HOOK1Q9UJC3 728 aaKnown RBP22.3■■□□□ 1.16
COL13A1-205ENST00000398978 PHLPP2Q6ZVD8 1323 aa22.3■■□□□ 1.16
COL13A1-205ENST00000398978 AKAP17AQ02040 695 aaKnown RBP22.3■■□□□ 1.16
COL13A1-205ENST00000398978 TBX2Q13207 712 aaPredicted RBP22.3■■□□□ 1.16
COL13A1-205ENST00000398978 TEX35Q5T0J7 233 aa22.3■■□□□ 1.16
COL13A1-205ENST00000398978 SRPRBQ9Y5M8 271 aaKnown RBP22.3■■□□□ 1.16
COL13A1-205ENST00000398978 NMT2O60551 498 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 SARSP49591 514 aaKnown RBP22.29■■□□□ 1.16
COL13A1-205ENST00000398978 MRPL44Q9H9J2 332 aaKnown RBP22.29■■□□□ 1.16
COL13A1-205ENST00000398978 JAG2Q9Y219 1238 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 NIP7Q9Y221 180 aaKnown RBP eCLIP22.29■■□□□ 1.16
COL13A1-205ENST00000398978 ITGB4P16144 1822 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 ADAMTS3O15072 1205 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 IGHMBP2P38935 993 aaKnown RBP22.29■■□□□ 1.16
COL13A1-205ENST00000398978 SYMPKQ92797 1274 aaKnown RBP22.29■■□□□ 1.16
COL13A1-205ENST00000398978 BLZF1Q9H2G9 400 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 BCL9O00512 1426 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 ZSCAN12O43309 604 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 VEGFAP15692 232 aaPredicted RBP22.29■■□□□ 1.16
COL13A1-205ENST00000398978 CASQ1P31415 396 aa22.29■■□□□ 1.16
COL13A1-205ENST00000398978 ENAHQ8N8S7 591 aaPredicted RBP22.29■■□□□ 1.16
COL13A1-205ENST00000398978 TADA3O75528 432 aa22.28■■□□□ 1.16
COL13A1-205ENST00000398978 IL6STP40189 918 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-205ENST00000398978 EXOC5O00471 708 aa22.28■■□□□ 1.16
COL13A1-205ENST00000398978 POLR3GO15318 223 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-205ENST00000398978 KIF20AO95235 890 aa22.28■■□□□ 1.16
COL13A1-205ENST00000398978 TFRCP02786 760 aaKnown RBP22.28■■□□□ 1.16
COL13A1-205ENST00000398978 PNMA6AP0CW24 399 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-205ENST00000398978 GABPB1Q06547 395 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-205ENST00000398978 PKN1Q16512 942 aa22.28■■□□□ 1.16
COL13A1-205ENST00000398978 MLKLQ8NB16 471 aa22.28■■□□□ 1.16
COL13A1-205ENST00000398978 ENOX1Q8TC92 643 aaKnown RBP22.28■■□□□ 1.16
COL13A1-205ENST00000398978 KCNQ4P56696 695 aa22.27■■□□□ 1.16
COL13A1-205ENST00000398978 MYH2Q9UKX2 1941 aa22.27■■□□□ 1.16
COL13A1-205ENST00000398978 CCP110O43303 1012 aa22.27■■□□□ 1.16
COL13A1-205ENST00000398978 ATP6V1AP38606 617 aa22.27■■□□□ 1.16
COL13A1-205ENST00000398978 C3orf67Q6ZVT6 689 aa22.27■■□□□ 1.16
COL13A1-205ENST00000398978 MAGEB6P1A0A0J9YX57 407 aa22.27■■□□□ 1.15
COL13A1-205ENST00000398978 TRIM75PA6NK02 468 aa22.27■■□□□ 1.15
COL13A1-205ENST00000398978 CDC25AP30304 524 aa22.27■■□□□ 1.15
COL13A1-205ENST00000398978 FAM53CQ9NYF3 392 aa22.27■■□□□ 1.15
COL13A1-205ENST00000398978 ERVV-1B6SEH8 477 aa22.26■■□□□ 1.15
COL13A1-205ENST00000398978 CCT6AP40227 531 aaKnown RBP22.26■■□□□ 1.15
COL13A1-205ENST00000398978 RBL2Q08999 1139 aa22.26■■□□□ 1.15
COL13A1-205ENST00000398978 COL4A1P02462 1669 aa22.26■■□□□ 1.15
COL13A1-205ENST00000398978 LRP6O75581 1613 aa22.26■■□□□ 1.15
COL13A1-205ENST00000398978 XIRP1Q702N8 1843 aaKnown RBP22.26■■□□□ 1.15
COL13A1-205ENST00000398978 CRKLP46109 303 aaKnown RBP22.26■■□□□ 1.15
COL13A1-205ENST00000398978 PLA2G4AP47712 749 aa22.26■■□□□ 1.15
COL13A1-205ENST00000398978 DPYDQ12882 1025 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms