RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 IKBKBO14920 756 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 TM4SF1P30408 202 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 KRBA2Q6ZNG9 492 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 FILIP1Q7Z7B0 1213 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 FAM13BQ9NYF5 915 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 ARPP21Q9UBL0 812 aaPredicted RBP15.92■□□□□ 0.14
PRAME-202ENST00000398743 ORC4O43929 436 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 DDAH1O94760 285 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 PTPREP23469 700 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 TROAPQ12815 778 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 PNOCQ13519 176 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 LONRF3Q496Y0 759 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 AMIGO3Q86WK7 504 aa15.92■□□□□ 0.14
PRAME-202ENST00000398743 ELOA2Q8IYF1 753 aaPredicted RBP15.92■□□□□ 0.14
PRAME-202ENST00000398743 HOOK1Q9UJC3 728 aaKnown RBP15.92■□□□□ 0.14
PRAME-202ENST00000398743 FBXO2Q9UK22 296 aaPredicted RBP15.92■□□□□ 0.14
PRAME-202ENST00000398743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.92■□□□□ 0.141e-7■■□□□ 11.9
PRAME-202ENST00000398743 THSD7AQ9UPZ6 1657 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 ZBTB22O15209 634 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 PRPF3O43395 683 aaKnown RBP15.91■□□□□ 0.14
PRAME-202ENST00000398743 FUT2Q10981 343 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 NCAPHQ15003 741 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 FAM182BQ5T319 152 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 ISM2Q6H9L7 571 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 METTL16Q86W50 562 aaKnown RBP15.91■□□□□ 0.14
PRAME-202ENST00000398743 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
PRAME-202ENST00000398743 MAST2Q6P0Q8 1798 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 RFC4P35249 363 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 GTF2F1P35269 517 aaKnown RBP eCLIP15.9■□□□□ 0.142e-7■■■■□ 20.3
PRAME-202ENST00000398743 GSDMDP57764 484 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 PKN1Q16512 942 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 SPTY2D1Q68D10 685 aaPredicted RBP15.9■□□□□ 0.14
PRAME-202ENST00000398743 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
PRAME-202ENST00000398743 ZNF579Q8NAF0 562 aaKnown RBP15.9■□□□□ 0.14
PRAME-202ENST00000398743 CABP5Q9NP86 173 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 VPS54Q9P1Q0 977 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 IMPACTQ9P2X3 320 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 SMC2O95347 1197 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 PLEKHA8P1O95397 391 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 KRT2P35908 639 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 SBK1Q52WX2 424 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 TXNRD3Q86VQ6 643 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 PHF20Q9BVI0 1012 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 SRPRBQ9Y5M8 271 aaKnown RBP15.9■□□□□ 0.14
PRAME-202ENST00000398743 IRS2Q9Y4H2 1338 aa15.9■□□□□ 0.14
PRAME-202ENST00000398743 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
PRAME-202ENST00000398743 PDE4BQ07343 736 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 ARID5BQ14865 1188 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 TRAPPC3LQ5T215 181 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 OLFM4Q6UX06 510 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 XPO4Q9C0E2 1151 aaKnown RBP15.89■□□□□ 0.13
PRAME-202ENST00000398743 IFNKQ9P0W0 207 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 ANKIB1Q9P2G1 1089 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 V9GY48 417 aaPredicted RBP15.89■□□□□ 0.13
PRAME-202ENST00000398743 MYH13Q9UKX3 1938 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 RBM10P98175 930 aaKnown RBP15.89■□□□□ 0.13
PRAME-202ENST00000398743 GRIN1Q05586 938 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 GRAPQ13588 217 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 TMTC3Q6ZXV5 915 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 CTCFLQ8NI51 663 aaPredicted RBP15.89■□□□□ 0.13
PRAME-202ENST00000398743 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
PRAME-202ENST00000398743 SHISA4Q96DD7 197 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 OSBPL5Q9H0X9 879 aaPredicted RBP15.89■□□□□ 0.13
PRAME-202ENST00000398743 BRMS1Q9HCU9 246 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 JAG2Q9Y219 1238 aa15.89■□□□□ 0.13
PRAME-202ENST00000398743 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
PRAME-202ENST00000398743 IGSF3O75054 1194 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 SKILP12757 684 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 ATP2B1P20020 1258 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 MYL5Q02045 173 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 EVX2Q03828 476 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 C16orf45Q96MC5 204 aaPredicted RBP15.88■□□□□ 0.13
PRAME-202ENST00000398743 NOL10Q9BSC4 688 aaKnown RBP15.88■□□□□ 0.13
PRAME-202ENST00000398743 LEMD3Q9Y2U8 911 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 MORC2Q9Y6X9 1032 aaPredicted RBP15.88■□□□□ 0.13
PRAME-202ENST00000398743 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
PRAME-202ENST00000398743 LAMB1P07942 1786 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 hCG_1642624A0A1W2PR95 340 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 POLR2DO15514 142 aaKnown RBP15.87■□□□□ 0.13
PRAME-202ENST00000398743 LMOD1P29536 600 aaPredicted RBP15.87■□□□□ 0.13
PRAME-202ENST00000398743 FAM47AQ5JRC9 791 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 FOXP4Q8IVH2 680 aaPredicted RBP15.87■□□□□ 0.13
PRAME-202ENST00000398743 TRIM75PA6NK02 468 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 NMT2O60551 498 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 CYP2D6P10635 497 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 CCZ1BP86790 482 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 CCZ1P86791 482 aaPredicted RBP15.87■□□□□ 0.13
PRAME-202ENST00000398743 MDM2Q00987 491 aaPredicted RBP15.87■□□□□ 0.13
PRAME-202ENST00000398743 POSTNQ15063 836 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 TPD52L1Q16890 204 aaPredicted RBP15.87■□□□□ 0.13
PRAME-202ENST00000398743 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 WDR66Q8TBY9 1149 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 PDCL3Q9H2J4 239 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 MCM9Q9NXL9 1143 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 SPATA31A6Q5VVP1 1343 aa15.87■□□□□ 0.13
PRAME-202ENST00000398743 CNTNAP5Q8WYK1 1306 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms