RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 SPATA31A5Q5VU36 1347 aa15□□□□□ -0.01
PRAME-201ENST00000398741 SPATA31A7Q8IWB4 1347 aa15□□□□□ -0.01
PRAME-201ENST00000398741 ITGB4P16144 1822 aa15□□□□□ -0.01
PRAME-201ENST00000398741 A0A0G2JS52 829 aa15□□□□□ -0.01
PRAME-201ENST00000398741 XBP1P17861 261 aa15□□□□□ -0.01
PRAME-201ENST00000398741 CYP7A1P22680 504 aa15□□□□□ -0.01
PRAME-201ENST00000398741 GOLGA8FQ08AF8 430 aa15□□□□□ -0.01
PRAME-201ENST00000398741 GOLGA8DPQ0D2H9 430 aa15□□□□□ -0.01
PRAME-201ENST00000398741 CCDC93Q567U6 631 aa15□□□□□ -0.01
PRAME-201ENST00000398741 PDILTQ8N807 584 aa15□□□□□ -0.01
PRAME-201ENST00000398741 ZNF579Q8NAF0 562 aaKnown RBP15□□□□□ -0.01
PRAME-201ENST00000398741 ZHX1Q9UKY1 873 aaPredicted RBP15□□□□□ -0.01
PRAME-201ENST00000398741 NFE2L3Q9Y4A8 694 aa15□□□□□ -0.01
PRAME-201ENST00000398741 SRPRBQ9Y5M8 271 aaKnown RBP15□□□□□ -0.01
PRAME-201ENST00000398741 MINDY4BA8MYZ0 360 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 ARHGAP6O43182 974 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 PRR29P0C7W0 189 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 PTPN21Q16825 1174 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 ERCC6LQ2NKX8 1250 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 KRT222Q8N1A0 295 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 TRIML1Q8N9V2 468 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 ESR2Q92731 530 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 CABP5Q9NP86 173 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 RTL9Q8NET4 1388 aa14.99□□□□□ -0.01
PRAME-201ENST00000398741 PARP10Q53GL7 1025 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 NT5DC1Q5TFE4 455 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 ENOX1Q8TC92 643 aaKnown RBP14.98□□□□□ -0.01
PRAME-201ENST00000398741 NUP98P52948 1817 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 EIF5P55010 431 aaKnown RBP14.98□□□□□ -0.01
PRAME-201ENST00000398741 MORC3Q14149 939 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 ZNF827Q17R98 1081 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 MNS1Q8NEH6 495 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 OXER1Q8TDS5 423 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 NGLY1Q96IV0 654 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 BAG1Q99933 345 aaPredicted RBP14.98□□□□□ -0.01
PRAME-201ENST00000398741 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
PRAME-201ENST00000398741 CCDC87Q9NVE4 849 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 INTS13Q9NVM9 706 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 ABCF2Q9UG63 623 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 THRAP3Q9Y2W1 955 aaKnown RBP14.98□□□□□ -0.01
PRAME-201ENST00000398741 TNKSO95271 1327 aa14.98□□□□□ -0.01
PRAME-201ENST00000398741 SARSP49591 514 aaKnown RBP14.97□□□□□ -0.01
PRAME-201ENST00000398741 GABPB1Q06547 395 aaPredicted RBP14.97□□□□□ -0.01
PRAME-201ENST00000398741 FMR1Q06787 632 aaKnown RBP eCLIP14.97□□□□□ -0.016e-14■□□□□ 9.2
PRAME-201ENST00000398741 CHRNDQ07001 517 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 PPP2R5BQ15173 497 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 SPECC1LQ69YQ0 1117 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 TRMT44Q8IYL2 757 aaKnown RBP14.97□□□□□ -0.01
PRAME-201ENST00000398741 GRAMD1CQ8IYS0 662 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
PRAME-201ENST00000398741 SDR42E1Q8WUS8 393 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 CSRNP2Q9H175 543 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 RAI14Q9P0K7 980 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 MAGEB6P1A0A0J9YX57 407 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 GOLGA6L9A6NEM1 432 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 URI1O94763 535 aaPredicted RBP14.97□□□□□ -0.01
PRAME-201ENST00000398741 REXO1L1PQ8IX06 675 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
PRAME-201ENST00000398741 IQSEC3Q9UPP2 1182 aaPredicted RBP14.97□□□□□ -0.01
PRAME-201ENST00000398741 PPP2R2CQ9Y2T4 447 aa14.97□□□□□ -0.01
PRAME-201ENST00000398741 DOCK2Q92608 1830 aa14.96□□□□□ -0.01
PRAME-201ENST00000398741 TRIM75PA6NK02 468 aa14.96□□□□□ -0.01
PRAME-201ENST00000398741 ACTN4O43707 911 aaKnown RBP14.96□□□□□ -0.01
PRAME-201ENST00000398741 TRIM65Q6PJ69 517 aa14.96□□□□□ -0.01
PRAME-201ENST00000398741 GNL3LQ9NVN8 582 aaKnown RBP14.96□□□□□ -0.01
PRAME-201ENST00000398741 KIF20AO95235 890 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 ZNF18P17022 549 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 KRT2P35908 639 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 PLCD1P51178 756 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 TBX2Q13207 712 aaPredicted RBP14.96□□□□□ -0.02
PRAME-201ENST00000398741 ARHGAP29Q52LW3 1261 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 TMEM139Q8IV31 216 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 FAM177A1Q8N128 213 aaPredicted RBP14.96□□□□□ -0.02
PRAME-201ENST00000398741 LRRN4CLQ8ND94 238 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 UBXN4Q92575 508 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 VPS54Q9P1Q0 977 aa14.96□□□□□ -0.02
PRAME-201ENST00000398741 NIP7Q9Y221 180 aaKnown RBP eCLIP14.96□□□□□ -0.02
PRAME-201ENST00000398741 STX10O60499 249 aa14.95□□□□□ -0.02
PRAME-201ENST00000398741 H2AFXP16104 143 aaPredicted RBP14.95□□□□□ -0.02
PRAME-201ENST00000398741 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
PRAME-201ENST00000398741 CRKLP46109 303 aaKnown RBP14.95□□□□□ -0.02
PRAME-201ENST00000398741 INTS5Q6P9B9 1019 aaKnown RBP14.95□□□□□ -0.02
PRAME-201ENST00000398741 ZNF771Q7L3S4 317 aaPredicted RBP14.95□□□□□ -0.02
PRAME-201ENST00000398741 CATIPQ7Z7H3 387 aa14.95□□□□□ -0.02
PRAME-201ENST00000398741 DHX58Q96C10 678 aa14.95□□□□□ -0.02
PRAME-201ENST00000398741 ZSCAN10Q96SZ4 725 aaPredicted RBP14.95□□□□□ -0.02
PRAME-201ENST00000398741 BRMS1Q9HCU9 246 aa14.95□□□□□ -0.02
PRAME-201ENST00000398741 ARGLU1Q9NWB6 273 aaPredicted RBP14.95□□□□□ -0.02
PRAME-201ENST00000398741 AATFQ9NY61 560 aaKnown RBP eCLIP14.95□□□□□ -0.023e-7■□□□□ 9.1
PRAME-201ENST00000398741 ANAPC4Q9UJX5 808 aa14.95□□□□□ -0.02
PRAME-201ENST00000398741 CHD4Q14839 1912 aa14.95□□□□□ -0.02
PRAME-201ENST00000398741 VWA3AA6NCI4 1184 aa14.94□□□□□ -0.02
PRAME-201ENST00000398741 IGSF3O75054 1194 aa14.94□□□□□ -0.02
PRAME-201ENST00000398741 ERCC5P28715 1186 aaPredicted RBP14.94□□□□□ -0.02
PRAME-201ENST00000398741 SEC23AQ15436 765 aa14.94□□□□□ -0.02
PRAME-201ENST00000398741 IFIT1BQ5T764 474 aaKnown RBP14.94□□□□□ -0.02
PRAME-201ENST00000398741 BARGINQ6ZT62 677 aa14.94□□□□□ -0.02
PRAME-201ENST00000398741 USP49Q70CQ1 688 aa14.94□□□□□ -0.02
PRAME-201ENST00000398741 ADGRA1Q86SQ6 560 aa14.94□□□□□ -0.02
PRAME-201ENST00000398741 CDC5LQ99459 802 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms