RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 VWA3AA6NCI4 1184 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 CCDC172P0C7W6 258 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 ATP5JP18859 108 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 RPS6KB1P23443 525 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 ADD1P35611 737 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 TXLNAP40222 546 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 PUM3Q15397 648 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 E2F4Q16254 413 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 FCHSD1Q86WN1 690 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 FAM177A1Q8N128 213 aaPredicted RBP11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 FSIP1Q8NA03 581 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 CEP83Q9Y592 693 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 BRD2P25440 801 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 PIH1D3Q9NQM4 214 aaKnown RBP11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 ABCF2Q9UG63 623 aa11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 CICQ96RK0 1608 aaPredicted RBP11.58□□□□□ -0.56
HMGCLL1-205ENST00000398661 FGFR2P21802 821 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 GSCP56915 257 aaPredicted RBP11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 LRRC31Q6UY01 552 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 BANK1Q8NDB2 785 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 MAP4K1Q92918 833 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 HAUS7Q99871 368 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 FTOQ9C0B1 505 aaKnown RBP eCLIP11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 CXorf56Q9H5V9 222 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 ANKRD65E5RJM6 399 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 GNG11P61952 73 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 GPSM2P81274 684 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 MCM6Q14566 821 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 DPCR1Q3MIW9 517 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 HDXQ7Z353 690 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 EFCAB13Q8IY85 973 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 WDR24Q96S15 920 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 HMG20BQ9P0W2 317 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 FAN1Q9Y2M0 1017 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 CENPFP49454 3210 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 MYH15Q9Y2K3 1946 aa11.57□□□□□ -0.56
HMGCLL1-205ENST00000398661 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 FANCCQ00597 558 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 ZRSR1Q15695 479 aaKnown RBP11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 SLC4A8Q2Y0W8 1093 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 VPS37DQ86XT2 251 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 MSL3Q8N5Y2 521 aaKnown RBP11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 LPIN2Q92539 896 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 EVI5LQ96CN4 794 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 CEP89Q96ST8 783 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 AKAP2Q9Y2D5 859 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 PPP2R2CQ9Y2T4 447 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 MROH5Q6ZUA9 1318 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 SRGNP10124 158 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 WASHC4Q2M389 1173 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 BEND6Q5SZJ8 279 aaPredicted RBP11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 SDF4Q9BRK5 362 aa11.56□□□□□ -0.56
HMGCLL1-205ENST00000398661 N4BP1O75113 896 aaKnown RBP11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 GRAPQ13588 217 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 GRIK5Q16478 980 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 MXD3Q9BW11 206 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 PUS7LQ9H0K6 701 aaKnown RBP11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 KCNQ5Q9NR82 932 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 POLLQ9UGP5 575 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 LAMB2P55268 1798 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 GOLGA6L9A6NEM1 432 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 SMIM22K7EJ46 135 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 ME1P48163 572 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 NCAPHQ15003 741 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 CRY2Q49AN0 593 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 TADA2BQ86TJ2 420 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 FMR1NBQ8N0W7 255 aaPredicted RBP11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 MIGA1Q8NAN2 632 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 OSBP2Q969R2 916 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 KIFC2Q96AC6 838 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 USP28Q96RU2 1077 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 DONSONQ9NYP3 566 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 KIAA1468Q9P260 1216 aa11.55□□□□□ -0.56
HMGCLL1-205ENST00000398661 A0A087WUV0 522 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 UFL1O94874 794 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 SLC5A1P13866 664 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 SLC9C2Q5TAH2 1124 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 TTLL5Q6EMB2 1281 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 EP400NLQ6ZTU2 488 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 C2CD5Q86YS7 1000 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 DHX58Q96C10 678 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 ZNF396Q96N95 335 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 CASZ1Q86V15 1759 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 M0R2C6 588 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 ARHGAP6O43182 974 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 LMOD1P29536 600 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 USP5P45974 858 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 NLRP12P59046 1061 aa11.54□□□□□ -0.56
HMGCLL1-205ENST00000398661 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms