RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 PFKFB1P16118 471 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 IBSPP21815 317 aaPredicted RBP15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 TICAM2Q86XR7 235 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 WWC3Q9ULE0 1092 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 NR1I2O75469 434 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 CMA1P23946 247 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 GPT2Q8TD30 523 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 ZNF804BA4D1E1 1349 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 NEBLO76041 1014 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 KIAA0753Q2KHM9 967 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 ATP8A2Q9NTI2 1148 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 ARHGEF40Q8TER5 1519 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 FLAD1Q8NFF5 587 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 TTF2Q9UNY4 1162 aaKnown RBP15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 PHACTR2O75167 634 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 NF2P35240 595 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 ADD2P35612 726 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 HOOK3Q86VS8 718 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 PNMA1Q8ND90 353 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 SNX29Q8TEQ0 813 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 TEKT1Q969V4 418 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 MAPK8IP1Q9UQF2 711 aa15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 PPRC1Q5VV67 1664 aaKnown RBP15.98■□□□□ 0.15
PCDHGA11-201ENST00000398587 ATP10DQ9P241 1426 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 MYZAPP0CAP1 466 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 TCHPQ9BT92 498 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 V9GYY5 206 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 TUBBP07437 444 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 PDE6BP35913 854 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 FMNL3Q8IVF7 1028 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 PLS1Q14651 629 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 NECTIN1Q15223 517 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 RRAGDQ9NQL2 400 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 USP40Q9NVE5 1235 aa15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 INO80Q9ULG1 1556 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA11-201ENST00000398587 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 BTBD18B2RXH4 712 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 IMPG2Q9BZV3 1241 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 SERTAD1Q9UHV2 236 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 DDAH1O94760 285 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 LEMD3Q9Y2U8 911 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 ZNF335Q9H4Z2 1342 aaPredicted RBP15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 APBA3O96018 575 aa15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 NSUN7Q8NE18 718 aaKnown RBP15.96■□□□□ 0.15
PCDHGA11-201ENST00000398587 CAMSAP1Q5T5Y3 1602 aa15.96■□□□□ 0.14
PCDHGA11-201ENST00000398587 CALCRLQ16602 461 aa15.96■□□□□ 0.14
PCDHGA11-201ENST00000398587 BLIDQ8IZY5 108 aa15.96■□□□□ 0.14
PCDHGA11-201ENST00000398587 OSBP2Q969R2 916 aa15.96■□□□□ 0.14
PCDHGA11-201ENST00000398587 BCCIPQ9P287 314 aaKnown RBP eCLIP15.96■□□□□ 0.14
PCDHGA11-201ENST00000398587 CETN3O15182 167 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 TCP10Q12799 353 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 CCDC122Q5T0U0 273 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 SMCO2A6NFE2 343 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 ARHGAP6O43182 974 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 MAATS1Q7Z4T9 603 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 CABP7Q86V35 215 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 CMTR1Q8N1G2 835 aaKnown RBP15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 CHAMP1Q96JM3 812 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 PRDM10Q9NQV6 1147 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 MRVI1Q9Y6F6 885 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 A0A1W2PQ27 194 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 A0A1W2PQ64 194 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 A0A1W2PQD8 194 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 SCG2P13521 617 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 RTEL1Q9NZ71 1219 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 M0R2C6 588 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 PPP1R9BQ96SB3 815 aa15.95■□□□□ 0.14
PCDHGA11-201ENST00000398587 DIP2CQ9Y2E4 1556 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 EZRP15311 586 aaKnown RBP15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 EPHA10Q5JZY3 1008 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 PTPRMP28827 1452 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 XDHP47989 1333 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 BACH1O14867 736 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 MCM6Q14566 821 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 NUP58Q9BVL2 599 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 ZBTB21Q9ULJ3 1066 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 EPB41P11171 864 aaKnown RBP15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 PNOCQ13519 176 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 DCAF17Q5H9S7 520 aaPredicted RBP15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 GALNT17Q6IS24 598 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 NLGN1Q8N2Q7 840 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 STAMQ92783 540 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
PCDHGA11-201ENST00000398587 HSF2BPO75031 334 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 HERC4Q5GLZ8 1057 aaPredicted RBP15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 PI16Q6UXB8 463 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 GAS2L3Q86XJ1 694 aa15.93■□□□□ 0.14
PCDHGA11-201ENST00000398587 FRMD4BQ9Y2L6 1034 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms