RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 LONRF3Q496Y0 759 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 CYP26C1Q6V0L0 522 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 PREX2Q70Z35 1606 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
SOCS6-201ENST00000397942 IFT81Q8WYA0 676 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 ZEB2O60315 1214 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 GPIHBP1Q8IV16 184 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 AIFM3Q96NN9 605 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 UBAP1LF5GYI3 381 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 CYP27B1O15528 508 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 PLVAPQ9BX97 442 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 GJB4Q9NTQ9 266 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 OPA1O60313 960 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 MAPKAPK5Q8IW41 473 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 TMEM87AQ8NBN3 555 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 KRT13P13646 458 aa13.95□□□□□ -0.18
SOCS6-201ENST00000397942 GABPB1Q06547 395 aaPredicted RBP13.95□□□□□ -0.18
SOCS6-201ENST00000397942 PUS7LQ9H0K6 701 aaKnown RBP13.95□□□□□ -0.18
SOCS6-201ENST00000397942 UFL1O94874 794 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 KIF23Q02241 960 aaPredicted RBP13.94□□□□□ -0.18
SOCS6-201ENST00000397942 RESTQ13127 1097 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 TTC14Q96N46 770 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 ZMYM6O95789 1325 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 CIAO1O76071 339 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
SOCS6-201ENST00000397942 PTGDRQ13258 359 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 SLFNL1Q499Z3 407 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 PSMB7Q99436 277 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 WWC3Q9ULE0 1092 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 CFAP58Q5T655 872 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 CARMIL3Q8ND23 1372 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 TLDC2A0PJX2 215 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 CETN3O15182 167 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
SOCS6-201ENST00000397942 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 CNNM4Q6P4Q7 775 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 DYMQ7RTS9 669 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 HOOK3Q86VS8 718 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 TBC1D5Q92609 795 aa13.94□□□□□ -0.18
SOCS6-201ENST00000397942 ARFGAP2Q8N6H7 521 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 PNMA1Q8ND90 353 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 PLCD4Q9BRC7 762 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 AXIN2Q9Y2T1 843 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
SOCS6-201ENST00000397942 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 REXO1Q8N1G1 1221 aaKnown RBP13.93□□□□□ -0.18
SOCS6-201ENST00000397942 SNX29Q8TEQ0 813 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 ZFYVE16Q7Z3T8 1539 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 IFNAR1P17181 557 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 ATG3Q9NT62 314 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 PSDA5PKW4 1024 aaPredicted RBP13.93□□□□□ -0.18
SOCS6-201ENST00000397942 CTNNA2P26232 953 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 NR5A1Q13285 461 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 TUBB2AQ13885 445 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 KRT25Q7Z3Z0 450 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 TUBB2BQ9BVA1 445 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 CCNL1Q9UK58 526 aaPredicted RBP13.93□□□□□ -0.18
SOCS6-201ENST00000397942 H7C1W4 665 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 GCOM1H8Y6P7 765 aaPredicted RBP13.93□□□□□ -0.18
SOCS6-201ENST00000397942 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
SOCS6-201ENST00000397942 MYZAPP0CAP1 466 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 MNAT1P51948 309 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
SOCS6-201ENST00000397942 SETD1BQ9UPS6 1966 aaKnown RBP13.92□□□□□ -0.18
SOCS6-201ENST00000397942 NELFBQ8WX92 580 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 FAM207AQ9NSI2 230 aaPredicted RBP13.92□□□□□ -0.18
SOCS6-201ENST00000397942 ZSWIM5Q9P217 1185 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 RNASE9P60153 205 aaKnown RBP13.92□□□□□ -0.18
SOCS6-201ENST00000397942 TMEM94Q12767 1356 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 PAF1Q8N7H5 531 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 PPP2R2CQ9Y2T4 447 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 SNAP23O00161 211 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 STX10O60499 249 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 TOB2Q14106 344 aaPredicted RBP13.92□□□□□ -0.18
SOCS6-201ENST00000397942 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
SOCS6-201ENST00000397942 ERCC6L2Q5T890 1561 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 PPP4R3AQ6IN85 833 aa13.92□□□□□ -0.18
SOCS6-201ENST00000397942 ATP2C2O75185 946 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 GBP2P32456 591 aaPredicted RBP13.91□□□□□ -0.18
SOCS6-201ENST00000397942 RAD51AP2Q09MP3 1159 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 SPATA1Q5VX52 437 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 TGFBRAP1Q8WUH2 860 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 FAM13AO94988 1023 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 NLRC4Q9NPP4 1024 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 ZSCAN10Q96SZ4 725 aaPredicted RBP13.91□□□□□ -0.18
SOCS6-201ENST00000397942 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 ABCC3O15438 1527 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 ATP1A3P13637 1013 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 GDAP1L1Q96MZ0 367 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 UIMC1Q96RL1 719 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 SCG2P13521 617 aa13.91□□□□□ -0.18
SOCS6-201ENST00000397942 SLC1A4P43007 532 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms