RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 SLC35F6Q8N357 371 aa19.72■□□□□ 0.75
EWSR1-206ENST00000397938 LRP6O75581 1613 aa19.72■□□□□ 0.75
EWSR1-206ENST00000397938 IFNAR1P17181 557 aa19.72■□□□□ 0.75
EWSR1-206ENST00000397938 FECHP22830 423 aa19.72■□□□□ 0.75
EWSR1-206ENST00000397938 MCAMP43121 646 aa19.72■□□□□ 0.75
EWSR1-206ENST00000397938 GBP3Q9H0R5 595 aa19.72■□□□□ 0.75
EWSR1-206ENST00000397938 TTF2Q9UNY4 1162 aaKnown RBP19.72■□□□□ 0.75
EWSR1-206ENST00000397938 SRPRBQ9Y5M8 271 aaKnown RBP19.72■□□□□ 0.75
EWSR1-206ENST00000397938 SYNRGQ9UMZ2 1314 aa19.72■□□□□ 0.75
EWSR1-206ENST00000397938 LIFRP42702 1097 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 VSNL1P62760 191 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 CPLX3Q8WVH0 158 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 FOXP1Q9H334 677 aaPredicted RBP19.71■□□□□ 0.75
EWSR1-206ENST00000397938 EFCC1Q9HA90 598 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 WDR17Q8IZU2 1322 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 NID2Q14112 1375 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 MST1RQ04912 1400 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 RIC1Q4ADV7 1423 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 APPP05067 770 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 GUCY1A2P33402 732 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 CASP8Q14790 479 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 WHAMMP3Q1A5X7 153 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 CDKAL1Q5VV42 579 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 KCNJ14Q9UNX9 436 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 PCDHB6Q9Y5E3 794 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 SLC12A7Q9Y666 1083 aa19.71■□□□□ 0.75
EWSR1-206ENST00000397938 RHOXF2BP0C7M4 288 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 TNNT3P45378 269 aaPredicted RBP19.7■□□□□ 0.74
EWSR1-206ENST00000397938 CNGA4Q8IV77 575 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 FAM71BQ8TC56 605 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 CCDC51Q96ER9 411 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 RHOXF2Q9BQY4 288 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 CTAGE15A4D2H0 777 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 CTAGE8P0CG41 777 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 CUL4BQ13620 913 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 USP49Q70CQ1 688 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 CTAGE6Q86UF2 777 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 CTAGE4Q8IX94 777 aa19.7■□□□□ 0.74
EWSR1-206ENST00000397938 NAPGQ99747 312 aaPredicted RBP19.7■□□□□ 0.74
EWSR1-206ENST00000397938 TFRCP02786 760 aaKnown RBP19.69■□□□□ 0.74
EWSR1-206ENST00000397938 A1BGP04217 495 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 TUBBP07437 444 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 CASP14P31944 242 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 WWC2Q6AWC2 1192 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 CTAGE1Q96RT6 745 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 CDC5LQ99459 802 aaKnown RBP19.69■□□□□ 0.74
EWSR1-206ENST00000397938 ALS2Q96Q42 1657 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 UBR2Q8IWV8 1755 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 SEMA3EO15041 775 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 GYPCP04921 128 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 CD44P16070 742 aaKnown RBP19.69■□□□□ 0.74
EWSR1-206ENST00000397938 COL18A1P39060 1754 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 PIP4K2BP78356 416 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 CHD4Q14839 1912 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 UBE3CQ15386 1083 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 ITIH6Q6UXX5 1313 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 CSRNP2Q9H175 543 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 WWC3Q9ULE0 1092 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 TAF7LQ5H9L4 462 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 KLHL10Q6JEL2 608 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 ACRBPQ8NEB7 543 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 ISCA1Q9BUE6 129 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 CEP131Q9UPN4 1083 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 TBC1D2BQ9UPU7 963 aa19.69■□□□□ 0.74
EWSR1-206ENST00000397938 MYH8P13535 1937 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 IFIT3O14879 490 aaKnown RBP19.68■□□□□ 0.74
EWSR1-206ENST00000397938 FXR1P51114 621 aaKnown RBP eCLIP19.68■□□□□ 0.743e-6■□□□□ 10.2
EWSR1-206ENST00000397938 STX17P56962 302 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 FILIP1LQ4L180 1135 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 HSP90B2PQ58FF3 399 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 CSB-PGBD3P0DP91 1061 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 NR5A1Q13285 461 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 TTF1Q15361 905 aaPredicted RBP19.68■□□□□ 0.74
EWSR1-206ENST00000397938 TRIM22Q8IYM9 498 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 CCDC85AQ96PX6 553 aaPredicted RBP19.68■□□□□ 0.74
EWSR1-206ENST00000397938 PIH1D3Q9NQM4 214 aaKnown RBP19.68■□□□□ 0.74
EWSR1-206ENST00000397938 MYO1AQ9UBC5 1043 aa19.68■□□□□ 0.74
EWSR1-206ENST00000397938 ZNF532Q9HCE3 1301 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 PDE4CQ08493 712 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 INCENPQ9NQS7 918 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 STRN4Q9NRL3 753 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 ARHGAP25P42331 645 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 NOP2P46087 812 aaKnown RBP19.67■□□□□ 0.74
EWSR1-206ENST00000397938 FOXR1Q6PIV2 292 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 SH3RF1Q7Z6J0 888 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 ANKLE2Q86XL3 938 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 TMTC1Q8IUR5 882 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 CCDC102AQ96A19 550 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 ZNF512BQ96KM6 892 aaPredicted RBP19.67■□□□□ 0.74
EWSR1-206ENST00000397938 ACBD3Q9H3P7 528 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 MED4Q9NPJ6 270 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 ZSWIM5Q9P217 1185 aa19.67■□□□□ 0.74
EWSR1-206ENST00000397938 MKRN1Q9UHC7 482 aaKnown RBP19.67■□□□□ 0.74
EWSR1-206ENST00000397938 ABL1P00519 1130 aa19.66■□□□□ 0.74
EWSR1-206ENST00000397938 ERVK-24P63145 666 aa19.66■□□□□ 0.74
EWSR1-206ENST00000397938 ALX1Q15699 326 aa19.66■□□□□ 0.74
EWSR1-206ENST00000397938 WDR93Q6P2C0 686 aa19.66■□□□□ 0.74
EWSR1-206ENST00000397938 ZBTB9Q96C00 473 aa19.66■□□□□ 0.74
EWSR1-206ENST00000397938 AATFQ9NY61 560 aaKnown RBP eCLIP19.66■□□□□ 0.74
EWSR1-206ENST00000397938 TIAM2Q8IVF5 1701 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms