RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 WNK3Q9BYP7 1800 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 ARHGAP6O43182 974 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 PCCAP05165 728 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 ITGA6P23229 1130 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 ADKP55263 362 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 LONRF2Q1L5Z9 754 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 BAG1Q99933 345 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 RIPOR2Q9Y4F9 1068 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 ABCC12Q96J65 1359 aa18.2■□□□□ 0.5
CHMP1A-201ENST00000397901 CCDC151A5D8V7 595 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 BTBD18B2RXH4 712 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 STARD3NLO95772 234 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 CPP00450 1065 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 CSF1RP07333 972 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 PRR29P0C7W0 189 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 GNG11P61952 73 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 FMR1Q06787 632 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 GRAMD1CQ8IYS0 662 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 WDR24Q96S15 920 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 MAN1B1Q9UKM7 699 aa18.19■□□□□ 0.5
CHMP1A-201ENST00000397901 CCDC172P0C7W6 258 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 PDE6AP16499 860 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 GUCY1A2P33402 732 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 BRD3Q15059 726 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 TOGARAM2Q6ZUX3 1019 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 TMEM87BQ96K49 555 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 SLC4A9Q96Q91 983 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 VPS18Q9P253 973 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 KCNJ14Q9UNX9 436 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 CEP83Q9Y592 693 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 IFIT3O14879 490 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 MAP3K9P80192 1104 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 MCTP2Q6DN12 878 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 CCDC82Q8N4S0 544 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 ZBTB38Q8NAP3 1195 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 SLC12A7Q9Y666 1083 aa18.18■□□□□ 0.5
CHMP1A-201ENST00000397901 POLR2DO15514 142 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 PHKA1P46020 1223 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 MDM2Q00987 491 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 PPP2R3AQ06190 1150 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 POSTNQ15063 836 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 FCHSD1Q86WN1 690 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 NOSTRINQ8IVI9 506 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 SERTAD1Q9UHV2 236 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 MMS22LQ6ZRQ5 1243 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 MSL3Q8N5Y2 521 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 DESI2Q9BSY9 194 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 PLA2G12BQ9BX93 195 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 ECM29Q5VYK3 1845 aa18.17■□□□□ 0.5
CHMP1A-201ENST00000397901 MYCNP04198 464 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 TOB1P50616 345 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 GSCP56915 257 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 TBX2Q13207 712 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 TTF1Q15361 905 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 UBE3CQ15386 1083 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 CT47A1Q5JQC4 288 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 DIS3L2Q8IYB7 885 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 CMTR1Q8N1G2 835 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 TC2NQ8N9U0 490 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 GOLGA1Q92805 767 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 TBC1D2BQ9UPU7 963 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 AKAP11Q9UKA4 1901 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 MYO5AQ9Y4I1 1855 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 MYO1BO43795 1136 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 TXLNAP40222 546 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 RRP12Q5JTH9 1297 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 EFCAB13Q8IY85 973 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 TTLL11Q8NHH1 800 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 STRBPQ96SI9 672 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 ZKSCAN3Q9BRR0 538 aa18.16■□□□□ 0.5
CHMP1A-201ENST00000397901 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 KARSQ15046 597 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 SPECC1LQ69YQ0 1117 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 FOXR1Q6PIV2 292 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 GIGYF2Q6Y7W6 1299 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 SGMS1Q86VZ5 419 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 BANK1Q8NDB2 785 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 HOOK1Q9UJC3 728 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 MRFAP1Q9Y605 127 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 TACC3Q9Y6A5 838 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 ATRNO75882 1429 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 EXOC5O00471 708 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 EIF3JO75822 258 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 FMNL1O95466 1100 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 SAFBQ15424 915 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 HLFQ16534 295 aa18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 HELBQ8NG08 1087 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 HNRNPLLQ8WVV9 542 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 SAMSN1Q9NSI8 373 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms