RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 IL17REQ8NFR9 667 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 SH3GL2Q99962 352 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 CRACR2AQ9BSW2 395 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.32
PUM3-202ENST00000397885 GRIN2DO15399 1336 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 A0A1B0GVL5 298 aa13.02□□□□□ -0.33
PUM3-202ENST00000397885 GOLGA8KD6RF30 607 aa13.02□□□□□ -0.33
PUM3-202ENST00000397885 SKOR1P84550 965 aa13.02□□□□□ -0.33
PUM3-202ENST00000397885 MTX1Q13505 466 aa13.02□□□□□ -0.33
PUM3-202ENST00000397885 KARSQ15046 597 aaKnown RBP13.02□□□□□ -0.33
PUM3-202ENST00000397885 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
PUM3-202ENST00000397885 NAPGQ99747 312 aaPredicted RBP13.02□□□□□ -0.33
PUM3-202ENST00000397885 SH3BP1Q9Y3L3 701 aa13.02□□□□□ -0.33
PUM3-202ENST00000397885 ADGRG1Q9Y653 693 aa13.02□□□□□ -0.33
PUM3-202ENST00000397885 MYO1FO00160 1098 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 ZNF202O95125 648 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 USP14P54578 494 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 TBC1D8BQ0IIM8 1120 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 OS9Q13438 667 aaPredicted RBP13.01□□□□□ -0.33
PUM3-202ENST00000397885 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
PUM3-202ENST00000397885 TATDN2Q93075 761 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 VCPKMTQ9H867 229 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 CD248Q9HCU0 757 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 SPATS2LQ9NUQ6 558 aaKnown RBP13.01□□□□□ -0.33
PUM3-202ENST00000397885 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
PUM3-202ENST00000397885 KDM6AO15550 1401 aaPredicted RBP13.01□□□□□ -0.33
PUM3-202ENST00000397885 TMEM232C9JQI7 657 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 CEP85LQ5SZL2 805 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 AP1ARQ63HQ0 302 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 RCSD1Q6JBY9 416 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 HOMEZQ8IX15 550 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
PUM3-202ENST00000397885 ATP6V0A4Q9HBG4 840 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 POLR3EQ9NVU0 708 aa13.01□□□□□ -0.33
PUM3-202ENST00000397885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.336e-7■■■□□ 18.7
PUM3-202ENST00000397885 LY75O60449 1722 aa13□□□□□ -0.33
PUM3-202ENST00000397885 PAPPAQ13219 1627 aa13□□□□□ -0.33
PUM3-202ENST00000397885 EZRP15311 586 aaKnown RBP13□□□□□ -0.33
PUM3-202ENST00000397885 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
PUM3-202ENST00000397885 GGCXP38435 758 aa13□□□□□ -0.33
PUM3-202ENST00000397885 OLFM4Q6UX06 510 aa13□□□□□ -0.33
PUM3-202ENST00000397885 NBPF5PQ86XG9 351 aaPredicted RBP13□□□□□ -0.33
PUM3-202ENST00000397885 ZNF483Q8TF39 744 aaPredicted RBP13□□□□□ -0.33
PUM3-202ENST00000397885 GNL3Q9BVP2 549 aaKnown RBP eCLIP13□□□□□ -0.33
PUM3-202ENST00000397885 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
PUM3-202ENST00000397885 INTS13Q9NVM9 706 aa13□□□□□ -0.33
PUM3-202ENST00000397885 ETAA1Q9NY74 926 aa13□□□□□ -0.33
PUM3-202ENST00000397885 MED23Q9ULK4 1368 aa13□□□□□ -0.33
PUM3-202ENST00000397885 ALDH1L1O75891 902 aa13□□□□□ -0.33
PUM3-202ENST00000397885 EPB41P11171 864 aaKnown RBP13□□□□□ -0.33
PUM3-202ENST00000397885 CMA1P23946 247 aa13□□□□□ -0.33
PUM3-202ENST00000397885 CDR1P51861 262 aa13□□□□□ -0.33
PUM3-202ENST00000397885 ACTN3Q08043 901 aaPredicted RBP13□□□□□ -0.33
PUM3-202ENST00000397885 SEMA3FQ13275 785 aa13□□□□□ -0.33
PUM3-202ENST00000397885 ZNF569Q5MCW4 686 aa13□□□□□ -0.33
PUM3-202ENST00000397885 CLASRPQ8N2M8 674 aaKnown RBP13□□□□□ -0.33
PUM3-202ENST00000397885 PDILTQ8N807 584 aa13□□□□□ -0.33
PUM3-202ENST00000397885 MAB21L3Q8N8X9 362 aa13□□□□□ -0.33
PUM3-202ENST00000397885 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
PUM3-202ENST00000397885 AGPSO00116 658 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 BIN1O00499 593 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 RWDD2BP57060 319 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 GNGT1P63211 74 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 SF3A1Q15459 793 aaKnown RBP12.99□□□□□ -0.33
PUM3-202ENST00000397885 CCDC40Q4G0X9 1142 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 TLDC1Q6P9B6 456 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 FANCLQ9NW38 375 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 SRRM3A6NNA2 597 aaPredicted RBP12.99□□□□□ -0.33
PUM3-202ENST00000397885 AKR1B15C9JRZ8 316 aaPredicted RBP12.99□□□□□ -0.33
PUM3-202ENST00000397885 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 CYP27B1O15528 508 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 SLC8A1P32418 973 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 BRAPQ7Z569 592 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 RUBCNQ92622 972 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 NEK1Q96PY6 1258 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 DESI2Q9BSY9 194 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
PUM3-202ENST00000397885 LZTFL1Q9NQ48 299 aa12.99□□□□□ -0.33
PUM3-202ENST00000397885 GOLGA6BA6NDN3 693 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 OPA1O60313 960 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 CLNS1AP54105 237 aaKnown RBP12.98□□□□□ -0.33
PUM3-202ENST00000397885 AMPD2Q01433 879 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 STK38Q15208 465 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
PUM3-202ENST00000397885 SNCBQ16143 134 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 SKIDA1Q1XH10 827 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
PUM3-202ENST00000397885 NOA1Q8NC60 698 aaKnown RBP12.98□□□□□ -0.33
PUM3-202ENST00000397885 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms