RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NKX2-3Q8TAU0 364 aa20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 BEGAINQ9BUH8 593 aa20.03■□□□□ 0.8
TSPAN4-205ENST00000397406 ENTPD3O75355 529 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 PRKG1Q13976 671 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 SLC4A8Q2Y0W8 1093 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 MFSD6Q6ZSS7 791 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 CDAN1Q8IWY9 1227 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 ZFPM1Q8IX07 1006 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 RNF41Q9H4P4 317 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 CNNM2Q9H8M5 875 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 TMOD2Q9NZR1 351 aa20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.02■□□□□ 0.8
TSPAN4-205ENST00000397406 PCP11498 1178 aaKnown RBP20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 TRDNQ13061 729 aa20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 LDLRAD1Q5T700 205 aa20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 FKBP1CQ5VVH2 108 aa20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 DHX32Q7L7V1 743 aaKnown RBP20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 TBC1D2Q9BYX2 928 aa20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 PDRG1Q9NUG6 133 aa20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 RNF186Q9NXI6 227 aa20.02■□□□□ 0.79
TSPAN4-205ENST00000397406 B4E1Z4 1266 aa20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 CA12O43570 354 aa20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 MYO1BO43795 1136 aa20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 SLC3A2P08195 630 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 TCP10Q12799 353 aa20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 RALYLQ86SE5 291 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 KRT23Q9C075 422 aa20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 ALDH8A1Q9H2A2 487 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-205ENST00000397406 ATRNL1Q5VV63 1379 aa20■□□□□ 0.79
TSPAN4-205ENST00000397406 ORC4O43929 436 aa20■□□□□ 0.79
TSPAN4-205ENST00000397406 ANTXR2P58335 489 aa20■□□□□ 0.79
TSPAN4-205ENST00000397406 NBPF12Q5TAG4 269 aaPredicted RBP20■□□□□ 0.79
TSPAN4-205ENST00000397406 SH3BP5LQ7L8J4 393 aa20■□□□□ 0.79
TSPAN4-205ENST00000397406 TTC6Q86TZ1 520 aa20■□□□□ 0.79
TSPAN4-205ENST00000397406 DYNLL2Q96FJ2 89 aa20■□□□□ 0.79
TSPAN4-205ENST00000397406 WDR19Q8NEZ3 1342 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 DDTLA6NHG4 134 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 TCP10L2B9ZVM9 353 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 MCM5P33992 734 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 AK2P54819 239 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 C16orf86Q6ZW13 317 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 CYB5R4Q7L1T6 521 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 TEPSINQ96N21 525 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 IPO9Q96P70 1041 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 DHX36Q9H2U1 1008 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 VEZTQ9HBM0 779 aa19.99■□□□□ 0.79
TSPAN4-205ENST00000397406 TRPA1O75762 1119 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 GABPAQ06546 454 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 PDE4BQ07343 736 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 TOB2Q14106 344 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 TTLL12Q14166 644 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 BECN1Q14457 450 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 RASA3Q14644 834 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 MAP3K11Q16584 847 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 RRP12Q5JTH9 1297 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 CHST3Q7LGC8 479 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 FAM83AQ86UY5 434 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 HSCBQ8IWL3 235 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 FAM151AQ8WW52 585 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 AGXT2Q9BYV1 514 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 ZSWIM5Q9P217 1185 aa19.98■□□□□ 0.79
TSPAN4-205ENST00000397406 PRC1O43663 620 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 KDM4AO75164 1064 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 PRDM1O75626 825 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 MCM2P49736 904 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 MKRN3Q13064 507 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 FBXL16Q8N461 479 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 SLC44A5Q8NCS7 719 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 CLMNQ96JQ2 1002 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 LRRC2Q9BYS8 371 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 EHD4Q9H223 541 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 TOMM22Q9NS69 142 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 SAGE1Q9NXZ1 904 aa19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 ANGEL1Q9UNK9 670 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-205ENST00000397406 K7ELQ4 463 aaPredicted RBP19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 HLA-DOAP06340 250 aa19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 CDK8P49336 464 aa19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 Q6ZUG5 572 aa19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 ESR2Q92731 530 aa19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 ABHD8Q96I13 439 aa19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 SERPINB13Q9UIV8 391 aa19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 PPP2R3BQ9Y5P8 575 aa19.96■□□□□ 0.79
TSPAN4-205ENST00000397406 GREB1LQ9C091 1923 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-205ENST00000397406 USP2O75604 605 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-205ENST00000397406 NF2P35240 595 aa19.95■□□□□ 0.78
TSPAN4-205ENST00000397406 NT5C2P49902 561 aa19.95■□□□□ 0.78
TSPAN4-205ENST00000397406 METTL16Q86W50 562 aaKnown RBP19.95■□□□□ 0.78
TSPAN4-205ENST00000397406 PI4KBQ9UBF8 816 aa19.95■□□□□ 0.78
TSPAN4-205ENST00000397406 RASA1P20936 1047 aa19.94■□□□□ 0.78
TSPAN4-205ENST00000397406 ANKRD1Q15327 319 aa19.94■□□□□ 0.78
TSPAN4-205ENST00000397406 ARMC9Q7Z3E5 817 aa19.94■□□□□ 0.78
TSPAN4-205ENST00000397406 ZSCAN29Q8IWY8 852 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-205ENST00000397406 MTA3Q9BTC8 594 aa19.94■□□□□ 0.78
TSPAN4-205ENST00000397406 TMEM39BQ9GZU3 492 aa19.94■□□□□ 0.78
TSPAN4-205ENST00000397406 ZNF287Q9HBT7 754 aa19.94■□□□□ 0.78
TSPAN4-205ENST00000397406 RANBP6O60518 1105 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-205ENST00000397406 GJA5P36382 358 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms