RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SDR42E1Q8WUS8 393 aa17.52■□□□□ 0.4
SEC13-208ENST00000397109 EFCC1Q9HA90 598 aa17.52■□□□□ 0.4
SEC13-208ENST00000397109 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.52■□□□□ 0.4
SEC13-208ENST00000397109 TRIM17Q9Y577 477 aa17.52■□□□□ 0.4
SEC13-208ENST00000397109 PTPRFP10586 1907 aa17.52■□□□□ 0.4
SEC13-208ENST00000397109 PLCD1P51178 756 aa17.51■□□□□ 0.39
SEC13-208ENST00000397109 KIF22Q14807 665 aa17.51■□□□□ 0.39
SEC13-208ENST00000397109 C17orf99Q6UX52 265 aa17.51■□□□□ 0.39
SEC13-208ENST00000397109 OTOP1Q7RTM1 612 aa17.51■□□□□ 0.39
SEC13-208ENST00000397109 PI4K2BQ8TCG2 481 aa17.51■□□□□ 0.39
SEC13-208ENST00000397109 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
SEC13-208ENST00000397109 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
SEC13-208ENST00000397109 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
SEC13-208ENST00000397109 NAV1Q8NEY1 1877 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 RNF113AO15541 343 aaKnown RBP17.5■□□□□ 0.39
SEC13-208ENST00000397109 GDF11O95390 407 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 CERKLQ49MI3 558 aaPredicted RBP17.5■□□□□ 0.39
SEC13-208ENST00000397109 SH3D19Q5HYK7 790 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 SMC5Q8IY18 1101 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 AMOTL1Q8IY63 956 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 APPBP2Q92624 585 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 PUS7LQ9H0K6 701 aaKnown RBP17.5■□□□□ 0.39
SEC13-208ENST00000397109 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 C19orf81C9J6K1 198 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 GABPAQ06546 454 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.392e-9■□□□□ 8.8
SEC13-208ENST00000397109 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 PNMA3Q9UL41 463 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 HPS5Q9UPZ3 1129 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 SLC4A4Q9Y6R1 1079 aa17.5■□□□□ 0.39
SEC13-208ENST00000397109 PRKAB2O43741 272 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 GH2P01242 217 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 IGHDP01880 384 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 CHGBP05060 677 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 HMGCS2P54868 508 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 BACE1P56817 501 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 JAG1P78504 1218 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 TMOD4Q9NZQ9 345 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 SWAP70Q9UH65 585 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 CPA4Q9UI42 421 aa17.49■□□□□ 0.39
SEC13-208ENST00000397109 ADGRA2Q96PE1 1338 aa17.48■□□□□ 0.39
SEC13-208ENST00000397109 DDX60LQ5H9U9 1706 aaKnown RBP17.48■□□□□ 0.39
SEC13-208ENST00000397109 USP17L10C9JJH3 530 aa17.48■□□□□ 0.39
SEC13-208ENST00000397109 GNRH1P01148 92 aa17.48■□□□□ 0.39
SEC13-208ENST00000397109 SHMT1P34896 483 aa17.48■□□□□ 0.39
SEC13-208ENST00000397109 LACTBP83111 547 aaPredicted RBP17.48■□□□□ 0.39
SEC13-208ENST00000397109 ABCB5Q2M3G0 1257 aa17.48■□□□□ 0.39
SEC13-208ENST00000397109 OSBP2Q969R2 916 aa17.48■□□□□ 0.39
SEC13-208ENST00000397109 STRBPQ96SI9 672 aaKnown RBP17.48■□□□□ 0.39
SEC13-208ENST00000397109 CYP2C8P10632 490 aa17.47■□□□□ 0.39
SEC13-208ENST00000397109 GNAT2P19087 354 aa17.47■□□□□ 0.39
SEC13-208ENST00000397109 PDE1AP54750 535 aa17.47■□□□□ 0.39
SEC13-208ENST00000397109 MTMR2Q13614 643 aa17.47■□□□□ 0.39
SEC13-208ENST00000397109 GIMAP6Q6P9H5 292 aa17.47■□□□□ 0.39
SEC13-208ENST00000397109 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
SEC13-208ENST00000397109 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
SEC13-208ENST00000397109 USP17L12C9JPN9 530 aa17.46■□□□□ 0.39
SEC13-208ENST00000397109 USP17L21D6R901 530 aa17.46■□□□□ 0.39
SEC13-208ENST00000397109 BCRP11274 1271 aa17.46■□□□□ 0.39
SEC13-208ENST00000397109 OSBPP22059 807 aa17.46■□□□□ 0.39
SEC13-208ENST00000397109 TREML2Q5T2D2 321 aa17.46■□□□□ 0.39
SEC13-208ENST00000397109 C12orf60Q5U649 245 aa17.46■□□□□ 0.39
SEC13-208ENST00000397109 SMCR8Q8TEV9 937 aaPredicted RBP17.46■□□□□ 0.39
SEC13-208ENST00000397109 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
SEC13-208ENST00000397109 BAZ2AQ9UIF9 1905 aaKnown RBP17.46■□□□□ 0.39
SEC13-208ENST00000397109 CYP2D6P10635 497 aa17.45■□□□□ 0.38
SEC13-208ENST00000397109 PRMT2P55345 433 aa17.45■□□□□ 0.38
SEC13-208ENST00000397109 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
SEC13-208ENST00000397109 SHROOM1Q2M3G4 852 aaPredicted RBP17.45■□□□□ 0.38
SEC13-208ENST00000397109 USP17L2Q6R6M4 530 aa17.45■□□□□ 0.38
SEC13-208ENST00000397109 EVI5LQ96CN4 794 aa17.45■□□□□ 0.38
SEC13-208ENST00000397109 ARPP21Q9UBL0 812 aaPredicted RBP17.45■□□□□ 0.38
SEC13-208ENST00000397109 LOC285556D6RIA3 1793 aa17.45■□□□□ 0.38
SEC13-208ENST00000397109 GPAA1O43292 621 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 HOXD10P28358 340 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 HOXA7P31268 230 aaPredicted RBP17.44■□□□□ 0.38
SEC13-208ENST00000397109 NUCB1Q02818 461 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 TICAM2Q86XR7 235 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 CCDC17Q96LX7 622 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 GSG1L2A8MUP6 293 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 PSMC4P43686 418 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 GCLCP48506 637 aaPredicted RBP17.44■□□□□ 0.38
SEC13-208ENST00000397109 USP14P54578 494 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 CAP1Q01518 475 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 SBK1Q52WX2 424 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 ZMYM1Q5SVZ6 1142 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 CTR9Q6PD62 1173 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 DYNLL2Q96FJ2 89 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 FEZ1Q99689 392 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 TSHZ2Q9NRE2 1034 aa17.44■□□□□ 0.38
SEC13-208ENST00000397109 MPHOSPH10O00566 681 aaKnown RBP17.43■□□□□ 0.38
SEC13-208ENST00000397109 CDK8P49336 464 aa17.43■□□□□ 0.38
SEC13-208ENST00000397109 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
SEC13-208ENST00000397109 EVX2Q03828 476 aa17.43■□□□□ 0.38
SEC13-208ENST00000397109 TMEM179Q6ZVK1 233 aa17.43■□□□□ 0.38
SEC13-208ENST00000397109 C16orf86Q6ZW13 317 aa17.43■□□□□ 0.38
SEC13-208ENST00000397109 ARHGAP39Q9C0H5 1083 aa17.43■□□□□ 0.38
SEC13-208ENST00000397109 KIAA1683Q9H0B3 1180 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms