RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PICALMQ13492 652 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 CCDC152Q4G0S7 254 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 RPS6KA1Q15418 735 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 IMPACTQ9P2X3 320 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 RAD50Q92878 1312 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 CEP19Q96LK0 163 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 NBPF3Q9H094 633 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 VEZTQ9HBM0 779 aa11.4□□□□□ -0.58
COL4A4-201ENST00000396625 LDHAL6AQ6ZMR3 332 aa11.4□□□□□ -0.59
COL4A4-201ENST00000396625 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.59
COL4A4-201ENST00000396625 KSR1Q8IVT5 923 aa11.4□□□□□ -0.59
COL4A4-201ENST00000396625 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.59
COL4A4-201ENST00000396625 CARD6Q9BX69 1037 aa11.4□□□□□ -0.59
COL4A4-201ENST00000396625 KRT81Q14533 505 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 GOLGA5Q8TBA6 731 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 NUP58Q9BVL2 599 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 CARD10Q9BWT7 1032 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 PPP2R5AQ15172 486 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 PALM2Q8IXS6 379 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 USP6NLQ92738 828 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 VPS16Q9H269 839 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 SERPINI2O75830 405 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 STRN3Q13033 797 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 ZNF804AQ7Z570 1209 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 KCNH5Q8NCM2 988 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 BCRP11274 1271 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 LMNB2Q03252 620 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 DCLK2Q8N568 766 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 FBXO41Q8TF61 875 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 UQCRFS1P1P0C7P4 283 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 PPP1R2P41236 205 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 ATL3Q6DD88 541 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 SKA2Q8WVK7 121 aaPredicted RBP11.39□□□□□ -0.59
COL4A4-201ENST00000396625 SCOCQ9UIL1 159 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 A0A1B0GVL5 298 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 PLCD1P51178 756 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 PAK1Q13153 545 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL4A4-201ENST00000396625 SFMBT2Q5VUG0 894 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 ESYT1Q9BSJ8 1104 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 PAG1Q9NWQ8 432 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 AMOTL2Q9Y2J4 779 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 GNAT2P19087 354 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 C17orf53Q8N3J3 647 aaPredicted RBP11.39□□□□□ -0.59
COL4A4-201ENST00000396625 PKD2L1Q9P0L9 805 aa11.39□□□□□ -0.59
COL4A4-201ENST00000396625 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 HDAC11Q96DB2 347 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 RCN2Q14257 317 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 USHBP1Q8N6Y0 703 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 YY1AP1Q9H869 796 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 CCDC169A6NNP5 214 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 GNL1P36915 607 aaPredicted RBP11.38□□□□□ -0.59
COL4A4-201ENST00000396625 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 ZBTB41Q5SVQ8 909 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 PLEKHA4Q9H4M7 779 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 SPC25Q9HBM1 224 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 MED4Q9NPJ6 270 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 RIC8AQ9NPQ8 531 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 EXOC7Q9UPT5 735 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 TRPA1O75762 1119 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 RPSAP08865 295 aaKnown RBP11.38□□□□□ -0.59
COL4A4-201ENST00000396625 NBPF5PQ86XG9 351 aaPredicted RBP11.38□□□□□ -0.59
COL4A4-201ENST00000396625 GNGT2O14610 69 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 KCNA4P22459 653 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 GRAMD4Q6IC98 578 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 SNX21Q969T3 373 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 RPGRIP1Q96KN7 1286 aa11.38□□□□□ -0.59
COL4A4-201ENST00000396625 CWF19L2Q2TBE0 894 aaKnown RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 MICAL3Q7RTP6 2002 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 PARP1P09874 1014 aaKnown RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 CSGALNACT2Q8N6G5 542 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 ZBTB3Q9H5J0 574 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 ZRANB2O95218 330 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 ZNF75DP51815 510 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 KIF11P52732 1056 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 TMTC1Q8IUR5 882 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 CCDC138Q96M89 665 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 BRD3Q15059 726 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 CHST3Q7LGC8 479 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 SCYL3Q8IZE3 742 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 CHMP6Q96FZ7 201 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 EIF2AK4Q9P2K8 1649 aaKnown RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 HP1BP3Q5SSJ5 553 aaPredicted RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 CCDC68Q9H2F9 335 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 SUFUQ9UMX1 484 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 GSTA4O15217 222 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 MAFGO15525 162 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 LONP1P36776 959 aaKnown RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 TMTC3Q6ZXV5 915 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 GRK7Q8WTQ7 553 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 N4BP2L2Q92802 583 aaPredicted RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 SAR1BQ9Y6B6 198 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 F8W031 263 aaPredicted RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 POLR2DO15514 142 aaKnown RBP11.37□□□□□ -0.59
COL4A4-201ENST00000396625 STAM2O75886 525 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 SUN1O94901 812 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 APOBRQ0VD83 1088 aa11.37□□□□□ -0.59
COL4A4-201ENST00000396625 TRIM60Q495X7 471 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms