RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 RIMBP2O15034 1052 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 MYL1P05976 194 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 CNGA1P29973 690 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 OSBPL3Q9H4L5 887 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
GNE-202ENST00000396594 LRWD1Q9UFC0 647 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 PPARAQ07869 468 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 LETM2Q2VYF4 491 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 CCDC186Q7Z3E2 898 aa17.46■□□□□ 0.39
GNE-202ENST00000396594 REXO1Q8N1G1 1221 aaKnown RBP17.46■□□□□ 0.39
GNE-202ENST00000396594 BBOX1O75936 387 aa17.46■□□□□ 0.38
GNE-202ENST00000396594 TAOK1Q7L7X3 1001 aa17.46■□□□□ 0.38
GNE-202ENST00000396594 LRRC2Q9BYS8 371 aa17.46■□□□□ 0.38
GNE-202ENST00000396594 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 MAK16Q9BXY0 300 aaKnown RBP17.45■□□□□ 0.38
GNE-202ENST00000396594 ZMYM6O95789 1325 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 SYNRGQ9UMZ2 1314 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 RFX7Q2KHR2 1363 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 MED14O60244 1454 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 MAP3K4Q9Y6R4 1608 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 TNFAIP3P21580 790 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 TXNDC16Q9P2K2 825 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 TRAF5O00463 557 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 USP14P54578 494 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 HSPA2P54652 639 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 TRPC3Q13507 836 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 ASIC2Q16515 512 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 SLC9C1Q4G0N8 1177 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 CSADQ9Y600 493 aa17.45■□□□□ 0.38
GNE-202ENST00000396594 NOP56O00567 594 aaKnown RBP17.44■□□□□ 0.38
GNE-202ENST00000396594 CALCRLQ16602 461 aa17.44■□□□□ 0.38
GNE-202ENST00000396594 G2E3Q7L622 706 aa17.44■□□□□ 0.38
GNE-202ENST00000396594 SPATA24Q86W54 205 aa17.44■□□□□ 0.38
GNE-202ENST00000396594 BAG1Q99933 345 aaPredicted RBP17.44■□□□□ 0.38
GNE-202ENST00000396594 PCDHB13Q9Y5F0 798 aa17.44■□□□□ 0.38
GNE-202ENST00000396594 ZNF445P59923 1031 aa17.44■□□□□ 0.38
GNE-202ENST00000396594 GPATCH4Q5T3I0 446 aaKnown RBP17.44■□□□□ 0.38
GNE-202ENST00000396594 PARP2Q9UGN5 583 aa17.44■□□□□ 0.38
GNE-202ENST00000396594 FLOT1O75955 427 aa17.44■□□□□ 0.38
GNE-202ENST00000396594 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
GNE-202ENST00000396594 VWA3AA6NCI4 1184 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 ERCC6LQ2NKX8 1250 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 METTL14Q9HCE5 456 aaKnown RBP17.43■□□□□ 0.38
GNE-202ENST00000396594 PFKFB2O60825 505 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
GNE-202ENST00000396594 TAF12Q16514 161 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 GSTA5Q7RTV2 222 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 AFAP1L2Q8N4X5 818 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 CCDC110Q8TBZ0 833 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 BCCIPQ9P287 314 aaKnown RBP eCLIP17.43■□□□□ 0.38
GNE-202ENST00000396594 GCFC2P16383 781 aaKnown RBP17.43■□□□□ 0.38
GNE-202ENST00000396594 TBC1D8BQ0IIM8 1120 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 ASPRV1Q53RT3 343 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 GTF3C6Q969F1 213 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 CROCC2H7BZ55 1655 aa17.43■□□□□ 0.38
GNE-202ENST00000396594 FBLN1P23142 703 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 EEF2P13639 858 aaKnown RBP17.42■□□□□ 0.38
GNE-202ENST00000396594 TERF1P54274 439 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 GIMAP7Q8NHV1 300 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 RUNDC3BQ96NL0 473 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 MTA3Q9BTC8 594 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 CCNT1O60563 726 aaKnown RBP17.42■□□□□ 0.38
GNE-202ENST00000396594 GBP1P32455 592 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 IRX3P78415 501 aaPredicted RBP17.42■□□□□ 0.38
GNE-202ENST00000396594 OTUD7BQ6GQQ9 843 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
GNE-202ENST00000396594 ARHGAP6O43182 974 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
GNE-202ENST00000396594 ZSCAN10Q96SZ4 725 aaPredicted RBP17.41■□□□□ 0.38
GNE-202ENST00000396594 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 KRT40Q6A162 431 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 ADALQ6DHV7 355 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 RAB11FIP4Q86YS3 637 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 SNX29Q8TEQ0 813 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 AK8Q96MA6 479 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
GNE-202ENST00000396594 RGS12O14924 1447 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 ARHGEF37A1IGU5 675 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 MTMR3Q13615 1198 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 DHX36Q9H2U1 1008 aaKnown RBP17.41■□□□□ 0.38
GNE-202ENST00000396594 TIMM10P62072 90 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 PIK3AP1Q6ZUJ8 805 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 E7EWF7 191 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 ERCC5P28715 1186 aaPredicted RBP17.41■□□□□ 0.38
GNE-202ENST00000396594 KIF22Q14807 665 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 CSGALNACT2Q8N6G5 542 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 SMC6Q96SB8 1091 aa17.41■□□□□ 0.38
GNE-202ENST00000396594 NAPGQ99747 312 aaPredicted RBP17.41■□□□□ 0.38
GNE-202ENST00000396594 A1BGP04217 495 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 LTKP29376 864 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms