RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DBN1Q16643 649 aa15.47■□□□□ 0.07
COL4A3-202ENST00000396578 GLT8D2Q9H1C3 349 aa15.47■□□□□ 0.07
COL4A3-202ENST00000396578 TPX2Q9ULW0 747 aaKnown RBP15.47■□□□□ 0.07
COL4A3-202ENST00000396578 ATP6V1AP38606 617 aa15.47■□□□□ 0.07
COL4A3-202ENST00000396578 TMEM87BQ96K49 555 aa15.47■□□□□ 0.07
COL4A3-202ENST00000396578 MYCBPQ99417 103 aaPredicted RBP15.47■□□□□ 0.07
COL4A3-202ENST00000396578 VEZTQ9HBM0 779 aa15.47■□□□□ 0.07
COL4A3-202ENST00000396578 LRCH2Q5VUJ6 765 aa15.47■□□□□ 0.07
COL4A3-202ENST00000396578 NGLY1Q96IV0 654 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 TRIM4Q9C037 500 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 HOMER3Q9NSC5 361 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 ZNF445P59923 1031 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 SF3A3Q12874 501 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL4A3-202ENST00000396578 MTX1Q13505 466 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 CCDC84Q86UT8 332 aaPredicted RBP15.46■□□□□ 0.07
COL4A3-202ENST00000396578 RSAD2Q8WXG1 361 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 KLHL30Q0D2K2 578 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 TFCP2Q12800 502 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 PPP2R5EQ16537 467 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 NELFBQ8WX92 580 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 VPS37BQ9H9H4 285 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 VGLL3A8MV65 326 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 INPP1P49441 399 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 DIXDC1Q155Q3 683 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 PIK3AP1Q6ZUJ8 805 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 KRT28Q7Z3Y7 464 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 CCDC13Q8IYE1 715 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 STAG1Q8WVM7 1258 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 THEGQ9P2T0 379 aa15.46■□□□□ 0.07
COL4A3-202ENST00000396578 NIP7Q9Y221 180 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL4A3-202ENST00000396578 NOS1P29475 1434 aa15.46■□□□□ 0.06
COL4A3-202ENST00000396578 DNAJC8O75937 253 aaPredicted RBP15.46■□□□□ 0.06
COL4A3-202ENST00000396578 LONRF3Q496Y0 759 aa15.46■□□□□ 0.06
COL4A3-202ENST00000396578 LARSQ9P2J5 1176 aaKnown RBP15.46■□□□□ 0.06
COL4A3-202ENST00000396578 CHMP2AO43633 222 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 BAG2O95816 211 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 MAGEA1P43355 309 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 ARHGAP4P98171 946 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 AMFRQ9UKV5 643 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 ARHGEF35A5YM69 484 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 PALM2Q8IXS6 379 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 SH2D4AQ9H788 454 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 XAB2Q9HCS7 855 aaKnown RBP15.45■□□□□ 0.06
COL4A3-202ENST00000396578 GCNT3O95395 438 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 TRIM58Q8NG06 486 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 SDCCAG3Q96C92 435 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 MRPL44Q9H9J2 332 aaKnown RBP15.45■□□□□ 0.06
COL4A3-202ENST00000396578 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 SPECC1L-ADORA2AF8WAN1 911 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 GNA14O95837 355 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 AP1ARQ63HQ0 302 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 ANKRD42Q8N9B4 389 aa15.45■□□□□ 0.06
COL4A3-202ENST00000396578 ANGEL1Q9UNK9 670 aaKnown RBP15.45■□□□□ 0.06
COL4A3-202ENST00000396578 MSH6P52701 1360 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 DKC1O60832 514 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL4A3-202ENST00000396578 LONRF2Q1L5Z9 754 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 NXNQ6DKJ4 435 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 CXorf38Q8TB03 319 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 FAF1Q9UNN5 650 aaPredicted RBP15.44■□□□□ 0.06
COL4A3-202ENST00000396578 SNAPC4Q5SXM2 1469 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 GUCY2FP51841 1108 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 SNCBQ16143 134 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 LRRC43Q8N309 656 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 GRK7Q8WTQ7 553 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 PKD2L1Q9P0L9 805 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 ANKFY1Q9P2R3 1169 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 SESN3P58005 492 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 FAM71BQ8TC56 605 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 CAPS2Q9BXY5 557 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 BICC1Q9H694 974 aaKnown RBP15.44■□□□□ 0.06
COL4A3-202ENST00000396578 GNGT1P63211 74 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 PDZD8Q8NEN9 1154 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 EFCC1Q9HA90 598 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 CALCRLQ16602 461 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 C17orf53Q8N3J3 647 aaPredicted RBP15.44■□□□□ 0.06
COL4A3-202ENST00000396578 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 ANKRD2Q9GZV1 360 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 MUM1L1Q5H9M0 696 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 RASEFQ8IZ41 740 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 TMOD4Q9NZQ9 345 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 KDM2BQ8NHM5 1336 aa15.44■□□□□ 0.06
COL4A3-202ENST00000396578 RBBP5Q15291 538 aaKnown RBP15.43■□□□□ 0.06
COL4A3-202ENST00000396578 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.43■□□□□ 0.06
COL4A3-202ENST00000396578 TTC38Q5R3I4 469 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 ZC3H12CQ9C0D7 883 aaKnown RBP15.43■□□□□ 0.06
COL4A3-202ENST00000396578 RRAGDQ9NQL2 400 aaPredicted RBP15.43■□□□□ 0.06
COL4A3-202ENST00000396578 NFE2L3Q9Y4A8 694 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 SLC27A2O14975 620 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 TYW1Q9NV66 732 aaKnown RBP15.43■□□□□ 0.06
COL4A3-202ENST00000396578 MRC2Q9UBG0 1479 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 CCDC93Q567U6 631 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 NACA2Q9H009 215 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 PPP1R9AQ9ULJ8 1098 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 AKAP4Q5JQC9 854 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms