RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
HOXA3-202ENST00000396352 TRIML1Q8N9V2 468 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 UBXN4Q92575 508 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 SLC4A4Q9Y6R1 1079 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 TDO2P48775 406 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 ADKP55263 362 aaKnown RBP17.97■□□□□ 0.47
HOXA3-202ENST00000396352 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
HOXA3-202ENST00000396352 WDR24Q96S15 920 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 CARD6Q9BX69 1037 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 DACH1Q9UI36 760 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 EFCAB8A8MWE9 144 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 PNMA6AP0CW24 399 aaPredicted RBP17.97■□□□□ 0.47
HOXA3-202ENST00000396352 GNAT2P19087 354 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
HOXA3-202ENST00000396352 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
HOXA3-202ENST00000396352 SAMSN1Q9NSI8 373 aaKnown RBP17.97■□□□□ 0.47
HOXA3-202ENST00000396352 RCAN1P53805 252 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 FANCBQ8NB91 859 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 MNS1Q8NEH6 495 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 MPHOSPH8Q99549 860 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 MTA3Q9BTC8 594 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 ZNF654Q8IZM8 581 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 PDILTQ8N807 584 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 NACAP1Q9BZK3 213 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 MYH2Q9UKX2 1941 aa17.96■□□□□ 0.47
HOXA3-202ENST00000396352 NUTM2AQ8IVF1 878 aaPredicted RBP17.96■□□□□ 0.46
HOXA3-202ENST00000396352 AK7Q96M32 723 aa17.96■□□□□ 0.46
HOXA3-202ENST00000396352 CDK11BP21127 795 aaKnown RBP17.95■□□□□ 0.46
HOXA3-202ENST00000396352 PLCD1P51178 756 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 NR1I3Q14994 352 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 FAM177A1Q8N128 213 aaPredicted RBP17.95■□□□□ 0.46
HOXA3-202ENST00000396352 KIFC2Q96AC6 838 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 RAI14Q9P0K7 980 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 COL22A1Q8NFW1 1626 aaPredicted RBP17.95■□□□□ 0.46
HOXA3-202ENST00000396352 A0A087X0B3 334 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 GOLGA6L9A6NEM1 432 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 MAP3K9P80192 1104 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 APTXQ7Z2E3 356 aaKnown RBP17.95■□□□□ 0.46
HOXA3-202ENST00000396352 CABP5Q9NP86 173 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 DISP2A7MBM2 1401 aa17.95■□□□□ 0.46
HOXA3-202ENST00000396352 A0A1B0GTH6 734 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 ERICH2A1L162 156 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
HOXA3-202ENST00000396352 PLA2G4AP47712 749 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 BCAMP50895 628 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 KANK3Q6NY19 840 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 TMTC2Q8N394 836 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 MIGA1Q8NAN2 632 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 NOL10Q9BSC4 688 aaKnown RBP17.94■□□□□ 0.46
HOXA3-202ENST00000396352 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 SEC23AQ15436 765 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 SLAIN2Q9P270 581 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 MRFAP1Q9Y605 127 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 BCL9LQ86UU0 1499 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 ERCC5P28715 1186 aaPredicted RBP17.94■□□□□ 0.46
HOXA3-202ENST00000396352 GNG11P61952 73 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 PPARAQ07869 468 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 SUSD4Q5VX71 490 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
HOXA3-202ENST00000396352 LAMB2P55268 1798 aa17.93■□□□□ 0.46
HOXA3-202ENST00000396352 CICQ96RK0 1608 aaPredicted RBP17.93■□□□□ 0.46
HOXA3-202ENST00000396352 CASQ1P31415 396 aa17.93■□□□□ 0.46
HOXA3-202ENST00000396352 ADGRA1Q86SQ6 560 aa17.93■□□□□ 0.46
HOXA3-202ENST00000396352 COL4A1P02462 1669 aa17.93■□□□□ 0.46
HOXA3-202ENST00000396352 KAT6BQ8WYB5 2073 aa17.93■□□□□ 0.46
HOXA3-202ENST00000396352 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
HOXA3-202ENST00000396352 ATP2B1P20020 1258 aa17.93■□□□□ 0.46
HOXA3-202ENST00000396352 EARS2Q5JPH6 523 aaKnown RBP17.93■□□□□ 0.46
HOXA3-202ENST00000396352 RNF26Q9BY78 433 aaPredicted RBP17.93■□□□□ 0.46
HOXA3-202ENST00000396352 ARGLU1Q9NWB6 273 aaPredicted RBP17.93■□□□□ 0.46
HOXA3-202ENST00000396352 AATFQ9NY61 560 aaKnown RBP eCLIP17.93■□□□□ 0.46
HOXA3-202ENST00000396352 PKN1Q16512 942 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 DESI2Q9BSY9 194 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 RNF41Q9H4P4 317 aaPredicted RBP17.92■□□□□ 0.46
HOXA3-202ENST00000396352 DUOX1Q9NRD9 1551 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 TMCO3Q6UWJ1 677 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 TNKSO95271 1327 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 MTF1Q14872 753 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 SH3RF1Q7Z6J0 888 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 EPC1Q9H2F5 836 aa17.92■□□□□ 0.46
HOXA3-202ENST00000396352 A0A1B0GUL6 1792 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 TPM1P09493 284 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 CD44P16070 742 aaKnown RBP17.91■□□□□ 0.46
HOXA3-202ENST00000396352 FUT2Q10981 343 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 CUL4BQ13620 913 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 DHX58Q96C10 678 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 EPSTI1Q96J88 318 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 UBAC1Q9BSL1 405 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 PHF20Q9BVI0 1012 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 MRPL44Q9H9J2 332 aaKnown RBP17.91■□□□□ 0.46
HOXA3-202ENST00000396352 CACNA1SQ13698 1873 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 TEX33O43247 280 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 FAM193AP78312 1265 aa17.91■□□□□ 0.46
HOXA3-202ENST00000396352 RSRC2Q7L4I2 434 aaKnown RBP17.91■□□□□ 0.46
HOXA3-202ENST00000396352 VPS54Q9P1Q0 977 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms