RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CCDC17Q96LX7 622 aa18.08■□□□□ 0.48
VAMP1-202ENST00000396308 DHX16O60231 1041 aaKnown RBP18.07■□□□□ 0.48
VAMP1-202ENST00000396308 RASA1P20936 1047 aa18.07■□□□□ 0.48
VAMP1-202ENST00000396308 IFIT1BQ5T764 474 aaKnown RBP18.07■□□□□ 0.48
VAMP1-202ENST00000396308 SPRYD3Q8NCJ5 442 aa18.07■□□□□ 0.48
VAMP1-202ENST00000396308 SLC44A5Q8NCS7 719 aa18.07■□□□□ 0.48
VAMP1-202ENST00000396308 L3MBTL3Q96JM7 780 aaPredicted RBP18.07■□□□□ 0.48
VAMP1-202ENST00000396308 ZKSCAN3Q9BRR0 538 aa18.07■□□□□ 0.48
VAMP1-202ENST00000396308 HACL1Q9UJ83 578 aa18.07■□□□□ 0.48
VAMP1-202ENST00000396308 TPCN1Q9ULQ1 816 aa18.07■□□□□ 0.48
VAMP1-202ENST00000396308 SLC12A7Q9Y666 1083 aa18.07■□□□□ 0.48
VAMP1-202ENST00000396308 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 CNTNAP1P78357 1384 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 PLIN4Q96Q06 1357 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 GLTPD2A6NH11 291 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 DDTLA6NHG4 134 aaPredicted RBP18.06■□□□□ 0.48
VAMP1-202ENST00000396308 EPS15P42566 896 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 GABPAQ06546 454 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 STK3Q13188 491 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 CUL4AQ13619 759 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 FAM47AQ5JRC9 791 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 CPLX2Q6PUV4 134 aaKnown RBP18.06■□□□□ 0.48
VAMP1-202ENST00000396308 SGMS1Q86VZ5 419 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 ZFPM1Q8IX07 1006 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 LARP6Q9BRS8 491 aaKnown RBP18.06■□□□□ 0.48
VAMP1-202ENST00000396308 LY9Q9HBG7 655 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 CWC22Q9HCG8 908 aaKnown RBP18.06■□□□□ 0.48
VAMP1-202ENST00000396308 PPP2R3BQ9Y5P8 575 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 TACC3Q9Y6A5 838 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
VAMP1-202ENST00000396308 PITPNM2Q9BZ72 1349 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 SMIM22K7EJ46 135 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 ZBTB43O43298 467 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 CALM1P0DP23 149 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 CALM2P0DP24 149 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 CALM3P0DP25 149 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 EVX2Q03828 476 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 ME3Q16798 604 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 CATIPQ7Z7H3 387 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 IGDCC4Q8TDY8 1250 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.05■□□□□ 0.48
VAMP1-202ENST00000396308 TCP11L1Q9NUJ3 509 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 GGA3Q9NZ52 723 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 GREB1LQ9C091 1923 aaPredicted RBP18.05■□□□□ 0.48
VAMP1-202ENST00000396308 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
VAMP1-202ENST00000396308 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
VAMP1-202ENST00000396308 PFKFB2O60825 505 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 EGFRP00533 1210 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
VAMP1-202ENST00000396308 RCAN1P53805 252 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 EVCP57679 992 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
VAMP1-202ENST00000396308 RASA3Q14644 834 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 ANGEL2Q5VTE6 544 aaKnown RBP18.04■□□□□ 0.48
VAMP1-202ENST00000396308 APOA5Q6Q788 366 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 USP50Q70EL3 339 aaPredicted RBP18.04■□□□□ 0.48
VAMP1-202ENST00000396308 NEDD1Q8NHV4 660 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 TRPM4Q8TD43 1214 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 GTF3C6Q969F1 213 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 TMEM39BQ9GZU3 492 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 SMC3Q9UQE7 1217 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
VAMP1-202ENST00000396308 CCDC196A0A1B0GTZ2 297 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 GOLGA8AA7E2F4 631 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 CPLX1O14810 134 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 CDKL5O76039 1030 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 SHMT1P34896 483 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 CERKLQ49MI3 558 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-202ENST00000396308 DCAF15Q66K64 600 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 SH3BP5LQ7L8J4 393 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 DGKHQ86XP1 1220 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 ENAHQ8N8S7 591 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-202ENST00000396308 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
VAMP1-202ENST00000396308 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
VAMP1-202ENST00000396308 DDAH1O94760 285 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 LARGE1O95461 756 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.48
VAMP1-202ENST00000396308 EPHX2P34913 555 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 SEC23AQ15436 765 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 IFFO2Q5TF58 517 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 METTL16Q86W50 562 aaKnown RBP18.02■□□□□ 0.48
VAMP1-202ENST00000396308 MICU3Q86XE3 530 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 ZNF654Q8IZM8 581 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 NECAB1Q8N987 351 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.48
VAMP1-202ENST00000396308 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
VAMP1-202ENST00000396308 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
VAMP1-202ENST00000396308 GOLGB1Q14789 3259 aaKnown RBP18.01■□□□□ 0.47
VAMP1-202ENST00000396308 TBC1D12O60347 775 aa18.01■□□□□ 0.47
VAMP1-202ENST00000396308 ABCB5Q2M3G0 1257 aa18.01■□□□□ 0.47
VAMP1-202ENST00000396308 TMEM179Q6ZVK1 233 aa18.01■□□□□ 0.47
VAMP1-202ENST00000396308 SULF1Q8IWU6 871 aa18.01■□□□□ 0.47
VAMP1-202ENST00000396308 DEFB129Q9H1M3 183 aa18.01■□□□□ 0.47
VAMP1-202ENST00000396308 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
VAMP1-202ENST00000396308 CIZ1Q9ULV3 898 aaPredicted RBP18.01■□□□□ 0.47
VAMP1-202ENST00000396308 MYH6P13533 1939 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms