RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 SHMT1P34896 483 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 ERO1BQ86YB8 467 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 IGSF3O75054 1194 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 HSPA1AP0DMV8 641 aaKnown RBP12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 HSPA1BP0DMV9 641 aaKnown RBP12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 CDK8P49336 464 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 HHIPL1Q96JK4 782 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 ZNF112Q9UJU3 913 aa12.05□□□□□ -0.48
THUMPD1-202ENST00000396083 CCL15-CCL14A0A0B4J2E2 113 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 CTNND1O60716 968 aaKnown RBP12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 GNAT2P19087 354 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 CCL15Q16663 113 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 SAMD1Q6SPF0 538 aaPredicted RBP12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 CASP8AP2Q9UKL3 1982 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 MYH8P13535 1937 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 AKR1B1P15121 316 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 PTH1RQ03431 593 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 SEPT2Q15019 361 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 ABCB5Q2M3G0 1257 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 FAM47AQ5JRC9 791 aa12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 ARPP21Q9UBL0 812 aaPredicted RBP12.04□□□□□ -0.48
THUMPD1-202ENST00000396083 IGF2BP3O00425 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 TBC1D12O60347 775 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 TBC1D8O95759 1140 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 HMGCS2P54868 508 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 GABPAQ06546 454 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 PPARAQ07869 468 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 BMP2KLQ5H9B9 411 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 PTPN18Q99952 460 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 ZBTB21Q9ULJ3 1066 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 MTMR2Q13614 643 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 GADL1Q6ZQY3 521 aa12.03□□□□□ -0.48
THUMPD1-202ENST00000396083 ATAD5Q96QE3 1844 aa12.02□□□□□ -0.48
THUMPD1-202ENST00000396083 HIP1O00291 1037 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 FOXN1O15353 648 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 ASNSP08243 561 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 MAP2K2P36507 400 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 BRI3BPQ8WY22 251 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 FEZ1Q99689 392 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 R3HDMLQ9H3Y0 253 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 ANO2Q9NQ90 1003 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 ZBTB48P10074 688 aaPredicted RBP12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 FAM43AQ8N2R8 423 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 EHD4Q9H223 541 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 CABP5Q9NP86 173 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 TACC3Q9Y6A5 838 aa12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 DDX60LQ5H9U9 1706 aaKnown RBP12.02□□□□□ -0.49
THUMPD1-202ENST00000396083 RANBP6O60518 1105 aaKnown RBP12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 MAP2K1Q02750 393 aaPredicted RBP12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 PPATQ06203 517 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 TATDN1Q6P1N9 297 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 SPICE1Q8N0Z3 855 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 NMT2O60551 498 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 SNAPC2Q13487 334 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 JMYQ8N9B5 988 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 RUFY2Q8WXA3 655 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 TAF6LQ9Y6J9 622 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 DOCK1Q14185 1865 aa12.01□□□□□ -0.49
THUMPD1-202ENST00000396083 COL2A1P02458 1487 aaPredicted RBP12□□□□□ -0.49
THUMPD1-202ENST00000396083 SGSM2O43147 1006 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 LBX1P52954 281 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
THUMPD1-202ENST00000396083 ZNF444Q8N0Y2 327 aaPredicted RBP12□□□□□ -0.49
THUMPD1-202ENST00000396083 ZNF280CQ8ND82 737 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 RNF186Q9NXI6 227 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 AFG3L2Q9Y4W6 797 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 BTBD19C9JJ37 291 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 PEX10O60683 326 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 CYP2C8P10632 490 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 RASA1P20936 1047 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 GUCY1A2P33402 732 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 GTF2A2P52657 109 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 MFAP1P55081 439 aaKnown RBP12□□□□□ -0.49
THUMPD1-202ENST00000396083 PPIL2Q13356 520 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 TREML2Q5T2D2 321 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 IFNL1Q8IU54 200 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 TBC1D10CQ8IV04 446 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 ZKSCAN3Q9BRR0 538 aa12□□□□□ -0.49
THUMPD1-202ENST00000396083 A0A1W2PRG0 241 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 ZNF213O14771 459 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 TFAP4Q01664 338 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 SREBF2Q12772 1141 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 SBK1Q52WX2 424 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 NOL9Q5SY16 702 aaKnown RBP11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 GIMAP6Q6P9H5 292 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 ESYT1Q9BSJ8 1104 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms