RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 ATP10DQ9P241 1426 aa10.93□□□□□ -0.66
CDRT1-204ENST00000395906 NFAT5O94916 1531 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 TUBGCP6Q96RT7 1819 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 APBB1O00213 710 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 SKOR1P84550 965 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 NBPF15Q8N660 670 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 ATL2Q8NHH9 583 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 NSMCE1Q8WV22 266 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 RIN2Q8WYP3 895 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 RBM41Q96IZ5 413 aaKnown RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 MMADHCQ9H3L0 296 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 HYPKQ9NX55 129 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 PXDNQ92626 1479 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 MED1Q15648 1581 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 SOS2Q07890 1332 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 MAP3K5Q99683 1374 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 CTAGE15A4D2H0 777 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 RNF8O76064 485 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 CTAGE8P0CG41 777 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 ZBED6P86452 979 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 ACCSLQ4AC99 568 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 ACBD5Q5T8D3 534 aaPredicted RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 CTAGE6Q86UF2 777 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 TMEM139Q8IV31 216 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 CTAGE4Q8IX94 777 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 MIPOL1Q8TD10 442 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 RBM17Q96I25 401 aaKnown RBP10.92□□□□□ -0.66
CDRT1-204ENST00000395906 TSC22D3Q99576 134 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 TNS3Q68CZ2 1445 aa10.92□□□□□ -0.66
CDRT1-204ENST00000395906 TRPM3Q9HCF6 1732 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-204ENST00000395906 GOLGA6L10A6NI86 522 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 PDLIM1O00151 329 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 CEP85Q6P2H3 762 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 GORASP1Q9BQQ3 440 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-204ENST00000395906 RGPD2P0DJD1 1756 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 ADCY9O60503 1353 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 NUTM2BA6NNL0 878 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-204ENST00000395906 NUTM2EB1AL46 878 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-204ENST00000395906 GOLGA8KD6RF30 607 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 CBFA2T2O43439 604 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 BUB1BO60566 1050 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-204ENST00000395906 PFKFB2O60825 505 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 HSP90AB4PQ58FF6 505 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
CDRT1-204ENST00000395906 CCAR1Q8IX12 1150 aaKnown RBP10.91□□□□□ -0.66
CDRT1-204ENST00000395906 DTNBP1Q96EV8 351 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 YIPF2Q9BWQ6 316 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 TMEM165Q9HC07 324 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 SUN2Q9UH99 717 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 RIPOR2Q9Y4F9 1068 aa10.91□□□□□ -0.66
CDRT1-204ENST00000395906 RGPD5Q99666 1765 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 UBAP1LF5GYI3 381 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 AGPSO00116 658 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 SSBP05455 408 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDRT1-204ENST00000395906 GNAT1P11488 350 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 FANCCQ00597 558 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 ME3Q16798 604 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 WHAMMP3Q1A5X7 153 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 MPRIPQ6WCQ1 1025 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 TAX1BP1Q86VP1 789 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 GALNT15Q8N3T1 639 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 TRIM4Q9C037 500 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 LGR6Q9HBX8 967 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 PICK1Q9NRD5 415 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 C15orf41Q9Y2V0 281 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 B4DLN1 442 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 MGRN1O60291 552 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 STX10O60499 249 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 HMMRO75330 724 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 LINGO3P0C6S8 592 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 PAX3P23760 479 aa10.9□□□□□ -0.66
CDRT1-204ENST00000395906 A6NHS1 94 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 VAMP4O75379 141 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 CUL3Q13618 768 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 NAA35Q5VZE5 725 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 CCDC73Q6ZRK6 1079 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 CCDC121Q6ZUS5 278 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
CDRT1-204ENST00000395906 C8orf58Q8NAV2 365 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 CCDC148Q8NFR7 591 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 NECTIN2Q92692 538 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 RILPL2Q969X0 211 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 JAKMIP1Q96N16 626 aaKnown RBP10.89□□□□□ -0.67
CDRT1-204ENST00000395906 A0A087WWV3 80 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 GOLGA6BA6NDN3 693 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 MYO1EQ12965 1108 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 BLMHQ13867 455 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 CCDC57Q2TAC2 916 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 MFSD4BQ5TF39 518 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 CRELD2Q6UXH1 353 aaPredicted RBP10.89□□□□□ -0.67
CDRT1-204ENST00000395906 TOGARAM2Q6ZUX3 1019 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 IL17REQ8NFR9 667 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 NUP58Q9BVL2 599 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 EPN3Q9H201 632 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 HAUS2Q9NVX0 235 aa10.89□□□□□ -0.67
CDRT1-204ENST00000395906 DLG5Q8TDM6 1919 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms