RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TSPY3P0CV98 308 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 TSPY8P0CW00 308 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 KIF4BQ2VIQ3 1234 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 TBC1D10BQ4KMP7 808 aaPredicted RBP23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 FKBP1CQ5VVH2 108 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 SH3BP5LQ7L8J4 393 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 CRACR2BQ8N4Y2 399 aaPredicted RBP23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 GPRC5DQ9NZD1 345 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 GOLGA8BA8MQT2 603 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 SEC23AQ15436 765 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 FAM151AQ8WW52 585 aa23.96■■□□□ 1.43
VCPKMT-202ENST00000395860 DDNO94850 711 aaPredicted RBP23.95■■□□□ 1.42
VCPKMT-202ENST00000395860 DDIT3P35638 169 aa23.95■■□□□ 1.42
VCPKMT-202ENST00000395860 SCRN1Q12765 414 aa23.95■■□□□ 1.42
VCPKMT-202ENST00000395860 ENAHQ8N8S7 591 aaPredicted RBP23.95■■□□□ 1.42
VCPKMT-202ENST00000395860 CCT2P78371 535 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-202ENST00000395860 SYNE3Q6ZMZ3 975 aa23.94■■□□□ 1.42
VCPKMT-202ENST00000395860 TRIM34Q9BYJ4 488 aa23.94■■□□□ 1.42
VCPKMT-202ENST00000395860 SMC3Q9UQE7 1217 aa23.94■■□□□ 1.42
VCPKMT-202ENST00000395860 SLC12A7Q9Y666 1083 aa23.94■■□□□ 1.42
VCPKMT-202ENST00000395860 CNTNAP1P78357 1384 aa23.94■■□□□ 1.42
VCPKMT-202ENST00000395860 NMT2O60551 498 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 IFIT1BQ5T764 474 aaKnown RBP23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 APOA5Q6Q788 366 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 FAM83AQ86UY5 434 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 FOXP4Q8IVH2 680 aaPredicted RBP23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 CHMP4CQ96CF2 233 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 CSRNP1Q96S65 589 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 CHMP5Q9NZZ3 219 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 TNNI2P48788 182 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 CCDC178Q5BJE1 867 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 RAB11FIP4Q86YS3 637 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 TAOK2Q9UL54 1235 aa23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 CIZ1Q9ULV3 898 aaPredicted RBP23.93■■□□□ 1.42
VCPKMT-202ENST00000395860 ZBTB43O43298 467 aa23.92■■□□□ 1.42
VCPKMT-202ENST00000395860 TCP11L1Q9NUJ3 509 aa23.92■■□□□ 1.42
VCPKMT-202ENST00000395860 HPS5Q9UPZ3 1129 aa23.92■■□□□ 1.42
VCPKMT-202ENST00000395860 LMOD1P29536 600 aaPredicted RBP23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 SHMT1P34896 483 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 TNFAIP1Q13829 316 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 DPY19L2Q6NUT2 758 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 MICU3Q86XE3 530 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 NEDD1Q8NHV4 660 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 NCOA5Q9HCD5 579 aaKnown RBP23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 IL17RBQ9NRM6 502 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 EPS15P42566 896 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 METAP2P50579 478 aaKnown RBP eCLIP23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 DNAJC18Q9H819 358 aa23.91■■□□□ 1.42
VCPKMT-202ENST00000395860 ZNF654Q8IZM8 581 aa23.9■■□□□ 1.42
VCPKMT-202ENST00000395860 MYL10Q9BUA6 226 aa23.9■■□□□ 1.42
VCPKMT-202ENST00000395860 HACL1Q9UJ83 578 aa23.9■■□□□ 1.42
VCPKMT-202ENST00000395860 FAM196BA6NMK8 535 aa23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 DHX16O60231 1041 aaKnown RBP23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 SLURP2P0DP57 97 aa23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 RXRAP19793 462 aa23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 GJB2P29033 226 aa23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 DGKHQ86XP1 1220 aa23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 TRPM4Q8TD43 1214 aa23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 LLPHQ9BRT6 129 aaKnown RBP23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 TMEM39BQ9GZU3 492 aa23.89■■□□□ 1.42
VCPKMT-202ENST00000395860 ZC3H4Q9UPT8 1303 aaKnown RBP23.89■■□□□ 1.41
VCPKMT-202ENST00000395860 GOLGA8AA7E2F4 631 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 METTL16Q86W50 562 aaKnown RBP23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 SRCAPQ6ZRS2 3230 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 ASTN2O75129 1339 aaPredicted RBP23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 PLIN4Q96Q06 1357 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 GREB1LQ9C091 1923 aaPredicted RBP23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 DTNBO60941 627 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 AKR1B1P15121 316 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 CATIPQ7Z7H3 387 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 CCDC144CPQ8IYA2 1237 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 CCDC17Q96LX7 622 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 HERC5Q9UII4 1024 aaKnown RBP23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 UTRNP46939 3433 aa23.88■■□□□ 1.41
VCPKMT-202ENST00000395860 CPLX1O14810 134 aa23.87■■□□□ 1.41
VCPKMT-202ENST00000395860 RCAN1P53805 252 aa23.87■■□□□ 1.41
VCPKMT-202ENST00000395860 RASA3Q14644 834 aa23.87■■□□□ 1.41
VCPKMT-202ENST00000395860 RCSD1Q6JBY9 416 aa23.87■■□□□ 1.41
VCPKMT-202ENST00000395860 NUP133Q8WUM0 1156 aa23.87■■□□□ 1.41
VCPKMT-202ENST00000395860 ANKS1AQ92625 1134 aa23.87■■□□□ 1.41
VCPKMT-202ENST00000395860 SCAF8Q9UPN6 1271 aaKnown RBP23.87■■□□□ 1.41
VCPKMT-202ENST00000395860 CERKLQ49MI3 558 aaPredicted RBP23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 TATDN1Q6P1N9 297 aa23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 KAT14Q9H8E8 782 aa23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 STX8Q9UNK0 236 aa23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 NID2Q14112 1375 aa23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 MPHOSPH10O00566 681 aaKnown RBP23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 NUCB2P80303 420 aa23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 NSUN7Q8NE18 718 aaKnown RBP23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 ADARB2Q9NS39 739 aaKnown RBP23.86■■□□□ 1.41
VCPKMT-202ENST00000395860 JAK2O60674 1132 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 DDAH1O94760 285 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 CTDNEP1O95476 244 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 CALM1P0DP23 149 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 CALM2P0DP24 149 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 CALM3P0DP25 149 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 ANGEL2Q5VTE6 544 aaKnown RBP23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 APOBEC3FQ8IUX4 373 aaKnown RBP23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 SMARCC2Q8TAQ2 1214 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms