RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 APBB1IPQ7Z5R6 666 aaPredicted RBP10.08□□□□□ -0.8
MSH5-205ENST00000395853 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.08□□□□□ -0.8
MSH5-205ENST00000395853 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
MSH5-205ENST00000395853 F6X3S4 739 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 CCT5P48643 541 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 ACTN3Q08043 901 aaPredicted RBP10.08□□□□□ -0.8
MSH5-205ENST00000395853 CCDC144BQ3MJ40 725 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 TBC1D9Q6ZT07 1266 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 FAM114A1Q8IWE2 563 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 CCDC144CPQ8IYA2 1237 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 ALS2CR12Q96Q35 445 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 U3KPZ7 1027 aaPredicted RBP10.08□□□□□ -0.8
MSH5-205ENST00000395853 GOLGA6L10A6NI86 522 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 E2F6O75461 281 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 SCNN1BP51168 640 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 SLC7A5Q01650 507 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 TMED1Q13445 227 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 CDC37L1Q7L3B6 337 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 HDXQ7Z353 690 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 GCC1Q96CN9 775 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 RBM41Q96IZ5 413 aaKnown RBP10.07□□□□□ -0.8
MSH5-205ENST00000395853 RMDN2Q96LZ7 410 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 TMEM98Q9Y2Y6 226 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 TOGARAM1Q9Y4F4 1720 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 F8VZ95 297 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 CDC25BP30305 580 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 GCLCP48506 637 aaPredicted RBP10.07□□□□□ -0.8
MSH5-205ENST00000395853 UBE2HP62256 183 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 TAF7Q15545 349 aaPredicted RBP10.07□□□□□ -0.8
MSH5-205ENST00000395853 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 MAGEC3Q8TD91 643 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 FAM81BQ96LP2 452 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 MTRQ99707 1265 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
MSH5-205ENST00000395853 ZNF189O75820 626 aaPredicted RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 EIF4BP23588 611 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 SESN3P58005 492 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 G3BP1Q13283 466 aaKnown RBP eCLIP10.06□□□□□ -0.8
MSH5-205ENST00000395853 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 CCDC50Q8IVM0 306 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 MEIS3Q99687 375 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 FAM204AQ9H8W3 233 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 ATXN2Q99700 1313 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 ITGB4P16144 1822 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 KIF13BQ9NQT8 1826 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 PKD1L3Q7Z443 1732 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 TOMM70O94826 608 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 BRD3Q15059 726 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 SLC4A10Q6U841 1118 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 LUZP1Q86V48 1076 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 PAPOLBQ9NRJ5 636 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 MAPK8IP1Q9UQF2 711 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 N4BP1O75113 896 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 RNF8O76064 485 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 RPSAP08865 295 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 SMTNP53814 917 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 TGFB2P61812 414 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
MSH5-205ENST00000395853 MIS18BP1Q6P0N0 1132 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 CCDC80Q76M96 950 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 TMC6Q7Z403 805 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 TMEM110Q86TL2 294 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 CARD6Q9BX69 1037 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 NACA2Q9H009 215 aa10.06□□□□□ -0.8
MSH5-205ENST00000395853 UTRNP46939 3433 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 NCAPD2Q15021 1401 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 ERICH2A1L162 156 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 LRRC10BA6NIK2 292 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 XBP1P17861 261 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 SNCBQ16143 134 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 SNRNP27Q8WVK2 155 aaKnown RBP10.05□□□□□ -0.8
MSH5-205ENST00000395853 HOOK2Q96ED9 719 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 DHRS1Q96LJ7 313 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 YIPF3Q9GZM5 350 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 EPC1Q9H2F5 836 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 SLC39A2Q9NP94 309 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 TTC41PQ6P2S7 1318 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
MSH5-205ENST00000395853 M0R2C6 588 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 KIAA0754O94854 1291 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 FERP16591 822 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 CCZ1BP86790 482 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 CCZ1P86791 482 aaPredicted RBP10.05□□□□□ -0.8
MSH5-205ENST00000395853 ANKRD44Q8N8A2 993 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 CUL5Q93034 780 aa10.05□□□□□ -0.8
MSH5-205ENST00000395853 PHLPP2Q6ZVD8 1323 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 TESPA1A2RU30 521 aaPredicted RBP10.04□□□□□ -0.8
MSH5-205ENST00000395853 CCDC69A6NI79 296 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 KIF5CO60282 957 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 SLC8A1P32418 973 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 TRPC1P48995 793 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
MSH5-205ENST00000395853 MTHFD1LQ6UB35 978 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms