RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 KRT2P35908 639 aa16.45■□□□□ 0.22
SREBF1-205ENST00000395757 TPTE2Q6XPS3 522 aa16.45■□□□□ 0.22
SREBF1-205ENST00000395757 KRBA2Q6ZNG9 492 aa16.45■□□□□ 0.22
SREBF1-205ENST00000395757 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
SREBF1-205ENST00000395757 AK7Q96M32 723 aa16.45■□□□□ 0.22
SREBF1-205ENST00000395757 RBM5P52756 815 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■□□□ 12.3
SREBF1-205ENST00000395757 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
SREBF1-205ENST00000395757 TXNRD3Q86VQ6 643 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-205ENST00000395757 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 MINPP1Q9UNW1 487 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 USP17L3A6NCW0 530 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 USP17L4A6NCW7 530 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 ERICH4A6NGS2 130 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 CAMTA2O94983 1202 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 GSDMDP57764 484 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 IKQ13123 557 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-205ENST00000395757 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
SREBF1-205ENST00000395757 USP17L1Q7RTZ2 530 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 CBFA2T2O43439 604 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 GNAT2P19087 354 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 MECOMQ03112 1051 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 PDE4BQ07343 736 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 SLIT3O75094 1523 aa16.44■□□□□ 0.22
SREBF1-205ENST00000395757 CUTAO60888 179 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 AXDND1Q5T1B0 1012 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-205ENST00000395757 TRMT1LQ7Z2T5 733 aaKnown RBP16.43■□□□□ 0.22
SREBF1-205ENST00000395757 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-205ENST00000395757 ENAHQ8N8S7 591 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-205ENST00000395757 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 A0A1W2PQ27 194 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 A0A1W2PQ64 194 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 A0A1W2PQD8 194 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 ERCC6LQ2NKX8 1250 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-205ENST00000395757 MMP1P03956 469 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 RILPL1Q5EBL4 403 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.43■□□□□ 0.22
SREBF1-205ENST00000395757 EPC1Q9H2F5 836 aa16.43■□□□□ 0.22
SREBF1-205ENST00000395757 N4BP3O15049 544 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 TPM1P09493 284 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 PTGDRQ13258 359 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 RASGRP2Q7LDG7 609 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 UBXN4Q92575 508 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 SYMPKQ92797 1274 aaKnown RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 MRFAP1L1Q96HT8 127 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 TMEM51Q9NW97 253 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 CTNND2Q9UQB3 1225 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 TACC3Q9Y6A5 838 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 CDHR2Q9BYE9 1310 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 VEGFAP15692 232 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 IFNAR1P17181 557 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 DNA2P51530 1060 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
SREBF1-205ENST00000395757 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 FAM84BQ96KN1 310 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-205ENST00000395757 TXLNAP40222 546 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 TTC38Q5R3I4 469 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 LINC00116Q8NCU8 138 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 NUP88Q99567 741 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-205ENST00000395757 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 UFL1O94874 794 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 UBA5Q9GZZ9 404 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 IDEP14735 1019 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 UBA7P41226 1012 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 LETM2Q2VYF4 491 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 ARMCX5Q6P1M9 558 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 ZNF710Q8N1W2 664 aa16.41■□□□□ 0.22
SREBF1-205ENST00000395757 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-205ENST00000395757 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-205ENST00000395757 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
SREBF1-205ENST00000395757 HINFPQ9BQA5 517 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 NTSR2O95665 410 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 CCDC12Q8WUD4 166 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-205ENST00000395757 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
SREBF1-205ENST00000395757 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 JAKMIP3Q5VZ66 844 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 MTERF4Q7Z6M4 381 aaKnown RBP16.4■□□□□ 0.22
SREBF1-205ENST00000395757 CCDC150Q8NCX0 1101 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 TAB2Q9NYJ8 693 aa16.4■□□□□ 0.22
SREBF1-205ENST00000395757 PUF60Q9UHX1 559 aaKnown RBP16.4■□□□□ 0.22
SREBF1-205ENST00000395757 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 PP2D1A8MPX8 630 aa16.39■□□□□ 0.21
SREBF1-205ENST00000395757 INF2Q27J81 1249 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms