RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 SMARCE1Q969G3 411 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 CRAMP1Q96RY5 1269 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 STRBPQ96SI9 672 aaKnown RBP13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 KCND1Q9NSA2 647 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 BBOX1O75936 387 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 TPM1P09493 284 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 EVCP57679 992 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 SWT1Q5T5J6 900 aaKnown RBP13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 ATL3Q6DD88 541 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 TBC1D16Q8TBP0 767 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 EXOC4Q96A65 974 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 DRC1Q96MC2 740 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 NBPF3Q9H094 633 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 TNMDQ9H2S6 317 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 EPB41L4AQ9HCS5 686 aaPredicted RBP13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 TOMM22Q9NS69 142 aa13.72□□□□□ -0.21
PHACTR3-205ENST00000395636 CYP7A1P22680 504 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 SATB1Q01826 763 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 SUGP1Q8IWZ8 645 aaKnown RBP13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 BICD2Q8TD16 824 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 PPM1EQ8WY54 764 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 L2HGDHQ9H9P8 463 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 CLIP2Q9UDT6 1046 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 SLX4Q8IY92 1834 aa13.71□□□□□ -0.21
PHACTR3-205ENST00000395636 C6orf229H3BNL8 230 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 RIMBP2O15034 1052 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 NCOA7Q8NI08 942 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 UBXN6Q9BZV1 441 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 LEMD3Q9Y2U8 911 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 LTBP1Q14766 1721 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 SALL1Q9NSC2 1324 aa13.71□□□□□ -0.22
PHACTR3-205ENST00000395636 ZNF213O14771 459 aa13.7□□□□□ -0.22
PHACTR3-205ENST00000395636 STK11IPQ8N1F8 1099 aa13.7□□□□□ -0.22
PHACTR3-205ENST00000395636 ZNF396Q96N95 335 aaPredicted RBP13.7□□□□□ -0.22
PHACTR3-205ENST00000395636 CLSTN2Q9H4D0 955 aa13.7□□□□□ -0.22
PHACTR3-205ENST00000395636 NCOA5Q9HCD5 579 aaKnown RBP13.7□□□□□ -0.22
PHACTR3-205ENST00000395636 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
PHACTR3-205ENST00000395636 GGA1Q9UJY5 639 aa13.7□□□□□ -0.22
PHACTR3-205ENST00000395636 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 NPR1P16066 1061 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 HMGB2P26583 209 aaKnown RBP13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 MECOMQ03112 1051 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 ERCC6LQ2NKX8 1250 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 LRRC8AQ8IWT6 810 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 SDR42E1Q8WUS8 393 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 PGBD1Q96JS3 809 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 CXorf56Q9H5V9 222 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 ATP6V0A2Q9Y487 856 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 LRRC37AA6NMS7 1700 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 PRC1O43663 620 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 ACTN2P35609 894 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 PDE6BP35913 854 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 GSCP56915 257 aaPredicted RBP13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 EVX2Q03828 476 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 CAMK4Q16566 473 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 RBM43Q6ZSC3 357 aaKnown RBP13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 MED4Q9NPJ6 270 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 DUOX1Q9NRD9 1551 aa13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 BAZ2AQ9UIF9 1905 aaKnown RBP13.69□□□□□ -0.22
PHACTR3-205ENST00000395636 GSG1L2A8MUP6 293 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 CAVIN2O95810 425 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 TYRO3Q06418 890 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 ARHGAP29Q52LW3 1261 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 TBC1D10CQ8IV04 446 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 TDRD7Q8NHU6 1098 aaKnown RBP13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 NSUN4Q96CB9 384 aaKnown RBP13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 RCOR1Q9UKL0 485 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 ZBTB7AO95365 584 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 LUZP1Q86V48 1076 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 MASTLQ96GX5 879 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 CD209Q9NNX6 404 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 QSER1Q2KHR3 1735 aa13.68□□□□□ -0.22
PHACTR3-205ENST00000395636 SKILP12757 684 aa13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 OAS2P29728 719 aaKnown RBP13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 FOSBP53539 338 aa13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 TRDNQ13061 729 aa13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 DIXDC1Q155Q3 683 aa13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 RPAINQ86UA6 219 aa13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 PACS2Q86VP3 889 aa13.67□□□□□ -0.22
PHACTR3-205ENST00000395636 UBXN4Q92575 508 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms