RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 ERVK-24P63145 666 aa16.68■□□□□ 0.26
CHCHD2-201ENST00000395422 MVPQ14764 893 aaKnown RBP16.68■□□□□ 0.26
CHCHD2-201ENST00000395422 TEX11Q8IYF3 940 aa16.68■□□□□ 0.26
CHCHD2-201ENST00000395422 TMOD4Q9NZQ9 345 aa16.68■□□□□ 0.26
CHCHD2-201ENST00000395422 PRUNE2Q8WUY3 3088 aa16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 MEIS3Q99687 375 aa16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 APBA2Q99767 749 aa16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 FLRT1Q9NZU1 646 aa16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
CHCHD2-201ENST00000395422 ANP32CO43423 234 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 GDF11O95390 407 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 LDHCP07864 332 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 ASNSP08243 561 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 RGS2P41220 211 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 GSTO1P78417 241 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 PLEKHH3Q7Z736 793 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 SENP6Q9GZR1 1112 aaPredicted RBP16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 RAI14Q9P0K7 980 aa16.66■□□□□ 0.26
CHCHD2-201ENST00000395422 E9PSI1 815 aa16.65■□□□□ 0.26
CHCHD2-201ENST00000395422 CNMDO75829 334 aa16.65■□□□□ 0.26
CHCHD2-201ENST00000395422 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
CHCHD2-201ENST00000395422 AKAP2Q9Y2D5 859 aa16.65■□□□□ 0.26
CHCHD2-201ENST00000395422 NDUFB9Q9Y6M9 179 aa16.65■□□□□ 0.26
CHCHD2-201ENST00000395422 MUC3AQ02505 3323 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 ARID4AP29374 1257 aaPredicted RBP16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 MCAMP43121 646 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 ATN1P54259 1190 aaPredicted RBP16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 MAP2K5Q13163 448 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 DHX36Q9H2U1 1008 aaKnown RBP16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 AATFQ9NY61 560 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 NOB1Q9ULX3 412 aaKnown RBP16.64■□□□□ 0.25
CHCHD2-201ENST00000395422 SIPA1L1O43166 1804 aa16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 ZNF697Q5TEC3 545 aa16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 ADGRA1Q86SQ6 560 aa16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 CCAR1Q8IX12 1150 aaKnown RBP16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 TGFBRAP1Q8WUH2 860 aa16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 CDX2Q99626 313 aaPredicted RBP16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 LBHD1Q9BQE6 289 aaPredicted RBP16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 PALD1Q9ULE6 856 aa16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 FLT1P17948 1338 aa16.63■□□□□ 0.25
CHCHD2-201ENST00000395422 SRGAP3O43295 1099 aa16.62■□□□□ 0.25
CHCHD2-201ENST00000395422 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
CHCHD2-201ENST00000395422 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
CHCHD2-201ENST00000395422 LRP2BPQ9P2M1 347 aa16.62■□□□□ 0.25
CHCHD2-201ENST00000395422 DDX20Q9UHI6 824 aaKnown RBP16.62■□□□□ 0.25
CHCHD2-201ENST00000395422 RTP1P59025 263 aa16.61■□□□□ 0.25
CHCHD2-201ENST00000395422 SHHQ15465 462 aa16.61■□□□□ 0.25
CHCHD2-201ENST00000395422 C9orf50Q5SZB4 431 aa16.61■□□□□ 0.25
CHCHD2-201ENST00000395422 TRPV1Q8NER1 839 aa16.61■□□□□ 0.25
CHCHD2-201ENST00000395422 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
CHCHD2-201ENST00000395422 CYP2C19P33261 490 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 PPP4CP60510 307 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 MTX1Q13505 466 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 GORABQ5T7V8 394 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 MFSD14CQ5VZR4 134 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 USP17L2Q6R6M4 530 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 FOXP4Q8IVH2 680 aaPredicted RBP16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 CRACR2BQ8N4Y2 399 aaPredicted RBP16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 MAFAQ8NHW3 353 aaPredicted RBP16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 NPLOC4Q8TAT6 608 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 LPAR1Q92633 364 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 SEMA6BQ9H3T3 888 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 SNRKQ9NRH2 765 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 SAP30BPQ9UHR5 308 aaKnown RBP16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 RABGAP1Q9Y3P9 1069 aa16.6■□□□□ 0.25
CHCHD2-201ENST00000395422 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 DNM1LO00429 736 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 GH2P01242 217 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 IGHA2P01877 340 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 PTPREP23469 700 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 CNGA1P29973 690 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 TTYH1Q9H313 450 aaPredicted RBP16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 GINM1Q9NU53 330 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 BTBD7Q9P203 1132 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 HDAC5Q9UQL6 1122 aa16.59■□□□□ 0.25
CHCHD2-201ENST00000395422 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
CHCHD2-201ENST00000395422 BAG3O95817 575 aa16.58■□□□□ 0.24
CHCHD2-201ENST00000395422 HOXC6P09630 235 aa16.58■□□□□ 0.24
CHCHD2-201ENST00000395422 GRB14Q14449 540 aa16.58■□□□□ 0.24
CHCHD2-201ENST00000395422 GJC2Q5T442 439 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms