RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 DEFB118Q96PH6 123 aa23.52■■□□□ 1.36
COL11A2-204ENST00000395194 RANBP2P49792 3224 aaKnown RBP23.51■■□□□ 1.35
COL11A2-204ENST00000395194 GCLCP48506 637 aaPredicted RBP23.51■■□□□ 1.35
COL11A2-204ENST00000395194 IRX3P78415 501 aaPredicted RBP23.51■■□□□ 1.35
COL11A2-204ENST00000395194 UBE2Q1Q7Z7E8 422 aa23.51■■□□□ 1.35
COL11A2-204ENST00000395194 MAGEB6Q8N7X4 407 aa23.51■■□□□ 1.35
COL11A2-204ENST00000395194 PXYLP1Q8TE99 480 aa23.51■■□□□ 1.35
COL11A2-204ENST00000395194 ANTXR1Q9H6X2 564 aa23.51■■□□□ 1.35
COL11A2-204ENST00000395194 TMOD4Q9NZQ9 345 aa23.51■■□□□ 1.35
COL11A2-204ENST00000395194 SGPL1O95470 568 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 HLA-DOAP06340 250 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 FXR1P51114 621 aaKnown RBP eCLIP23.5■■□□□ 1.35
COL11A2-204ENST00000395194 BACE1P56817 501 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
COL11A2-204ENST00000395194 CHRDL2Q6WN34 429 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 AACSQ86V21 672 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 FOXP4Q8IVH2 680 aaPredicted RBP23.5■■□□□ 1.35
COL11A2-204ENST00000395194 WDR18Q9BV38 432 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 BCL11AQ9H165 835 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 ZBTB21Q9ULJ3 1066 aa23.5■■□□□ 1.35
COL11A2-204ENST00000395194 NAV1Q8NEY1 1877 aa23.49■■□□□ 1.35
COL11A2-204ENST00000395194 ALPK3Q96L96 1907 aa23.49■■□□□ 1.35
COL11A2-204ENST00000395194 USP5P45974 858 aa23.49■■□□□ 1.35
COL11A2-204ENST00000395194 IL1RAPL2Q9NP60 686 aa23.49■■□□□ 1.35
COL11A2-204ENST00000395194 TFRCP02786 760 aaKnown RBP23.48■■□□□ 1.35
COL11A2-204ENST00000395194 METTL16Q86W50 562 aaKnown RBP23.48■■□□□ 1.35
COL11A2-204ENST00000395194 P2RX7Q99572 595 aaKnown RBP23.48■■□□□ 1.35
COL11A2-204ENST00000395194 HTATIP2Q9BUP3 242 aa23.48■■□□□ 1.35
COL11A2-204ENST00000395194 USP17L10C9JJH3 530 aa23.47■■□□□ 1.35
COL11A2-204ENST00000395194 APBB1O00213 710 aa23.47■■□□□ 1.35
COL11A2-204ENST00000395194 ZBED9Q6R2W3 1325 aa23.47■■□□□ 1.35
COL11A2-204ENST00000395194 SZT2Q5T011 3432 aa23.47■■□□□ 1.35
COL11A2-204ENST00000395194 TRIM32Q13049 653 aa23.46■■□□□ 1.35
COL11A2-204ENST00000395194 TXNRD2Q9NNW7 524 aa23.46■■□□□ 1.35
COL11A2-204ENST00000395194 PAK6Q9NQU5 681 aaPredicted RBP23.46■■□□□ 1.35
COL11A2-204ENST00000395194 GH2P01242 217 aa23.45■■□□□ 1.34
COL11A2-204ENST00000395194 HERVK_113P62684 666 aa23.45■■□□□ 1.34
COL11A2-204ENST00000395194 MAP3K12Q12852 859 aa23.45■■□□□ 1.34
COL11A2-204ENST00000395194 ZYXQ15942 572 aaKnown RBP23.45■■□□□ 1.34
COL11A2-204ENST00000395194 ERC1Q8IUD2 1116 aa23.45■■□□□ 1.34
COL11A2-204ENST00000395194 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.45■■□□□ 1.34
COL11A2-204ENST00000395194 MORF4L1Q9UBU8 362 aa23.45■■□□□ 1.34
COL11A2-204ENST00000395194 GJD2Q9UKL4 321 aa23.45■■□□□ 1.34
COL11A2-204ENST00000395194 DDX60LQ5H9U9 1706 aaKnown RBP23.45■■□□□ 1.34
COL11A2-204ENST00000395194 C19orf81C9J6K1 198 aa23.44■■□□□ 1.34
COL11A2-204ENST00000395194 HMGCRP04035 888 aa23.44■■□□□ 1.34
COL11A2-204ENST00000395194 CYP2B6P20813 491 aa23.44■■□□□ 1.34
COL11A2-204ENST00000395194 HOXA7P31268 230 aaPredicted RBP23.44■■□□□ 1.34
COL11A2-204ENST00000395194 PAGR1Q9BTK6 254 aa23.44■■□□□ 1.34
COL11A2-204ENST00000395194 RHPN1Q8TCX5 695 aa23.43■■□□□ 1.34
COL11A2-204ENST00000395194 DIS3LQ8TF46 1054 aaKnown RBP23.43■■□□□ 1.34
COL11A2-204ENST00000395194 EMILIN3Q9NT22 766 aa23.43■■□□□ 1.34
COL11A2-204ENST00000395194 RBM27Q9P2N5 1060 aaKnown RBP23.43■■□□□ 1.34
COL11A2-204ENST00000395194 MYH8P13535 1937 aa23.42■■□□□ 1.34
COL11A2-204ENST00000395194 IGSF3O75054 1194 aa23.42■■□□□ 1.34
COL11A2-204ENST00000395194 RAB3GAP1Q15042 981 aa23.42■■□□□ 1.34
COL11A2-204ENST00000395194 PAWRQ96IZ0 340 aaKnown RBP23.42■■□□□ 1.34
COL11A2-204ENST00000395194 FEZ1Q99689 392 aa23.42■■□□□ 1.34
COL11A2-204ENST00000395194 GINM1Q9NU53 330 aa23.42■■□□□ 1.34
COL11A2-204ENST00000395194 SERPINB13Q9UIV8 391 aa23.42■■□□□ 1.34
COL11A2-204ENST00000395194 USP17L2Q6R6M4 530 aa23.41■■□□□ 1.34
COL11A2-204ENST00000395194 GPRC5AQ8NFJ5 357 aa23.41■■□□□ 1.34
COL11A2-204ENST00000395194 TRIB2Q92519 343 aa23.41■■□□□ 1.34
COL11A2-204ENST00000395194 DNAJC2Q99543 621 aaKnown RBP23.41■■□□□ 1.34
COL11A2-204ENST00000395194 CRISPLD2Q9H0B8 497 aa23.41■■□□□ 1.34
COL11A2-204ENST00000395194 RBPJLQ9UBG7 517 aa23.41■■□□□ 1.34
COL11A2-204ENST00000395194 ERVK-9P63128 1117 aa23.4■■□□□ 1.34
COL11A2-204ENST00000395194 ERVK-24P63145 666 aa23.4■■□□□ 1.34
COL11A2-204ENST00000395194 Q3C1V9 767 aa23.4■■□□□ 1.34
COL11A2-204ENST00000395194 RIOK1Q9BRS2 568 aaKnown RBP23.4■■□□□ 1.34
COL11A2-204ENST00000395194 PORCNQ9H237 461 aa23.4■■□□□ 1.34
COL11A2-204ENST00000395194 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
COL11A2-204ENST00000395194 NR2E3Q9Y5X4 410 aa23.4■■□□□ 1.34
COL11A2-204ENST00000395194 MAGEB6P1A0A0J9YX57 407 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 EVI5O60447 810 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 PLCD1P51178 756 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 EVX2Q03828 476 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 CERKLQ49MI3 558 aaPredicted RBP23.39■■□□□ 1.33
COL11A2-204ENST00000395194 HSP90AB4PQ58FF6 505 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 TATDN1Q6P1N9 297 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 CERS3Q8IU89 383 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 CCAR1Q8IX12 1150 aaKnown RBP23.39■■□□□ 1.33
COL11A2-204ENST00000395194 NUDT12Q9BQG2 462 aa23.39■■□□□ 1.33
COL11A2-204ENST00000395194 HMX1Q9NP08 348 aaPredicted RBP23.39■■□□□ 1.33
COL11A2-204ENST00000395194 BAZ2AQ9UIF9 1905 aaKnown RBP23.39■■□□□ 1.33
COL11A2-204ENST00000395194 RPTORQ8N122 1335 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 GOLIM4O00461 696 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 POLR3DP05423 398 aaPredicted RBP23.38■■□□□ 1.33
COL11A2-204ENST00000395194 PDE6AP16499 860 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 ABCB5Q2M3G0 1257 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 POTEEQ6S8J3 1075 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 TTC6Q86TZ1 520 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 ACER1Q8TDN7 264 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 EDC3Q96F86 508 aaKnown RBP23.38■■□□□ 1.33
COL11A2-204ENST00000395194 EHD4Q9H223 541 aa23.38■■□□□ 1.33
COL11A2-204ENST00000395194 PRKAR2AP13861 404 aaKnown RBP23.37■■□□□ 1.33
COL11A2-204ENST00000395194 SHMT1P34896 483 aa23.37■■□□□ 1.33
COL11A2-204ENST00000395194 PDE3AQ14432 1141 aa23.37■■□□□ 1.33
COL11A2-204ENST00000395194 SLC9C2Q5TAH2 1124 aa23.37■■□□□ 1.33
COL11A2-204ENST00000395194 CLASRPQ8N2M8 674 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms