RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 JAKMIP3Q5VZ66 844 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 ZBTB9Q96C00 473 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 KCNH3Q9ULD8 1083 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
SMARCD1-202ENST00000394963 GSTO1P78417 241 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 NOSTRINQ8IVI9 506 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 USP40Q9NVE5 1235 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 AFDNP55196 1824 aaKnown RBP18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 LETM2Q2VYF4 491 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 EYA3Q99504 573 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 KRT2P35908 639 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 DPCR1Q3MIW9 517 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 IFNKQ9P0W0 207 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
SMARCD1-202ENST00000394963 TCRBV5S4A2TA0A5A2 114 aa18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 GYS1P13807 737 aa18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 PLCD1P51178 756 aa18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 PPEF1O14829 653 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 C2CD5Q86YS7 1000 aa18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 KRI1Q8N9T8 703 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 BLZF1Q9H2G9 400 aa18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 PHRF1Q9P1Y6 1649 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 RCOR1Q9UKL0 485 aa18.21■□□□□ 0.51
SMARCD1-202ENST00000394963 STRCQ7RTU9 1775 aa18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 CLCN1P35523 988 aa18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 FOXN1O15353 648 aa18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 RXRBP28702 533 aa18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 ADALQ6DHV7 355 aa18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 STAG2Q8N3U4 1231 aa18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 SERTAD1Q9UHV2 236 aa18.2■□□□□ 0.5
SMARCD1-202ENST00000394963 CLSTN1O94985 981 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 SLC16A2P36021 539 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 CTAGE5O15320 804 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 WDHD1O75717 1129 aaPredicted RBP18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 GRIN1Q05586 938 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 ARID5BQ14865 1188 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 DEFB132Q7Z7B7 95 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 SMYD4Q8IYR2 804 aaPredicted RBP18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 CLRN2A0PK11 232 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 H0YIN7 160 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 TXLNAP40222 546 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 TNNI2P48788 182 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 NOM1Q5C9Z4 860 aaKnown RBP18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 SMARCE1Q969G3 411 aa18.19■□□□□ 0.5
SMARCD1-202ENST00000394963 UQCRHLA0A096LP55 91 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 UQCRHP07919 91 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 GOLGA8FQ08AF8 430 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 GOLGA8DPQ0D2H9 430 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 USP49Q70CQ1 688 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 FNBP4Q8N3X1 1017 aaPredicted RBP18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 CDK5RAP3Q96JB5 506 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 CEP131Q9UPN4 1083 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 RAD17O75943 681 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 UBA7P41226 1012 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 EPSTI1Q96J88 318 aa18.18■□□□□ 0.5
SMARCD1-202ENST00000394963 C21orf2O43822 256 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 IDEP14735 1019 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 SNAP25P60880 206 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 INF2Q27J81 1249 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 SPICE1Q8N0Z3 855 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 RTEL1Q9NZ71 1219 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 VEGFAP15692 232 aaPredicted RBP18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 IFNAR1P17181 557 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 LONRF3Q496Y0 759 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 KCNQ5Q9NR82 932 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 BIN2Q9UBW5 565 aaPredicted RBP18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 POLLQ9UGP5 575 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 TACC3Q9Y6A5 838 aa18.17■□□□□ 0.5
SMARCD1-202ENST00000394963 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 LIFRP42702 1097 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 NOLC1Q14978 699 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 FBXO33Q7Z6M2 555 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 ARPP21Q9UBL0 812 aaPredicted RBP18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 PPP1R9BQ96SB3 815 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 KIAA1468Q9P260 1216 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 CNTNAP4Q9C0A0 1308 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 FMNL1O95466 1100 aaPredicted RBP18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 HLA-DOAP06340 250 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 UVSSAQ2YD98 709 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 RIOK1Q9BRS2 568 aaKnown RBP18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 ATP8A2Q9NTI2 1148 aa18.16■□□□□ 0.5
SMARCD1-202ENST00000394963 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 PTGDRQ13258 359 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 RILPL1Q5EBL4 403 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 TTC38Q5R3I4 469 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 CSRNP2Q9H175 543 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms