RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CCDC173Q0VFZ6 552 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 ST3GAL1Q11201 340 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 DPP8Q6V1X1 898 aaPredicted RBP8.18□□□□□ -1.1
RTN4-205ENST00000394609 C15orf52Q6ZUT6 534 aaKnown RBP8.18□□□□□ -1.1
RTN4-205ENST00000394609 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 DZIP1Q86YF9 867 aaKnown RBP8.18□□□□□ -1.1
RTN4-205ENST00000394609 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 MPNDQ8N594 471 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 RDH13Q8NBN7 331 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 ZSCAN31Q96LW9 406 aaPredicted RBP8.18□□□□□ -1.1
RTN4-205ENST00000394609 GBP4Q96PP9 640 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 PPP1R9BQ96SB3 815 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 TMX4Q9H1E5 349 aaPredicted RBP8.18□□□□□ -1.1
RTN4-205ENST00000394609 ZDHHC9Q9Y397 364 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 CASZ1Q86V15 1759 aa8.18□□□□□ -1.1
RTN4-205ENST00000394609 FAM187AA6NFU0 413 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 GDF9O60383 454 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 LDHBP07195 334 aaKnown RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 GNAT2P19087 354 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 RPIAP49247 311 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 NUCB2P80303 420 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 CTDSPL2Q05D32 466 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 SULF1Q8IWU6 871 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 RIOK1Q9BRS2 568 aaKnown RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 NACAP1Q9BZK3 213 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 ALDH8A1Q9H2A2 487 aaPredicted RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 SH2B1Q9NRF2 756 aaPredicted RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 AATFQ9NY61 560 aaKnown RBP eCLIP8.17□□□□□ -1.1
RTN4-205ENST00000394609 NAP1L2Q9ULW6 460 aaPredicted RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 PDS5AQ29RF7 1337 aaKnown RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 MINDY4BA8MYZ0 360 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 SMIM22K7EJ46 135 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 IL1R1P14778 569 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 APOBRQ0VD83 1088 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 TRDNQ13061 729 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 ALX1Q15699 326 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 RALYLQ86SE5 291 aaKnown RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 NCOA7Q8NI08 942 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 CHAMP1Q96JM3 812 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 ZC3H12CQ9C0D7 883 aaKnown RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 SMC3Q9UQE7 1217 aa8.17□□□□□ -1.1
RTN4-205ENST00000394609 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 MYO5AQ9Y4I1 1855 aaKnown RBP8.17□□□□□ -1.1
RTN4-205ENST00000394609 B4E1Z4 1266 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 PRC1O43663 620 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 ZBTB7AO95365 584 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 MCM5P33992 734 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 ANTXR2P58335 489 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 GTF2IP78347 998 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 STYK1Q6J9G0 422 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 MB21D2Q8IYB1 491 aaPredicted RBP8.16□□□□□ -1.1
RTN4-205ENST00000394609 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
RTN4-205ENST00000394609 CYP2D7A0A087X1C5 515 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 PPFIA3O75145 1194 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 OFD1O75665 1012 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 GJB2P29033 226 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 CCT2P78371 535 aaKnown RBP8.15□□□□□ -1.1
RTN4-205ENST00000394609 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
RTN4-205ENST00000394609 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.1
RTN4-205ENST00000394609 RRP12Q5JTH9 1297 aaKnown RBP8.15□□□□□ -1.1
RTN4-205ENST00000394609 MFSD14BQ5SR56 506 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
RTN4-205ENST00000394609 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.1
RTN4-205ENST00000394609 CYB5R4Q7L1T6 521 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 ZSCAN30Q86W11 494 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 PANK2Q9BZ23 570 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 TOMM22Q9NS69 142 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 NEDD4P46934 1319 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 SALL1Q9NSC2 1324 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 A0A1B0GUL6 1792 aa8.15□□□□□ -1.1
RTN4-205ENST00000394609 ANKRD31Q8N7Z5 1873 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 FMNL1O95466 1100 aaPredicted RBP8.15□□□□□ -1.11
RTN4-205ENST00000394609 SYT1P21579 422 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 SLC4A8Q2Y0W8 1093 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 MORN1Q5T089 497 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 AKNAD1Q5T1N1 836 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 MFSD6Q6ZSS7 791 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 RAB11FIP4Q86YS3 637 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 MXD3Q9BW11 206 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 AGXT2Q9BYV1 514 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 COA1Q9GZY4 146 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 NCOA5Q9HCD5 579 aaKnown RBP8.15□□□□□ -1.11
RTN4-205ENST00000394609 KCNQ5Q9NR82 932 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 ZSWIM5Q9P217 1185 aa8.15□□□□□ -1.11
RTN4-205ENST00000394609 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
RTN4-205ENST00000394609 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 NRXN2Q9P2S2 1712 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 ZMYM6O95789 1325 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 USP17L12C9JPN9 530 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 USP17L21D6R901 530 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
RTN4-205ENST00000394609 C21orf2O43822 256 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 JAK2O60674 1132 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 KDM4AO75164 1064 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 BAG4O95429 457 aaKnown RBP8.14□□□□□ -1.11
RTN4-205ENST00000394609 BRD1O95696 1058 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms