RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ARHGEF25Q86VW2 580 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 TRIM42Q8IWZ5 723 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 CAGE1Q8TC20 777 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 CYFIP2Q96F07 1278 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 PHACTR1Q9C0D0 580 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 TBC1D2BQ9UPU7 963 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 TUBGCP6Q96RT7 1819 aa14.07□□□□□ -0.16
SLC28A1-203ENST00000394573 TEX33O43247 280 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 MGRN1O60291 552 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 ROR2Q01974 943 aaKnown RBP14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 TRIM68Q6AZZ1 485 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 C6orf89Q6UWU4 347 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 RBM41Q96IZ5 413 aaKnown RBP14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 C8orf76Q96K31 380 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 ALS2CR12Q96Q35 445 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 EBF2Q9HAK2 575 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 SBNO2Q9Y2G9 1366 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 SPDYE5A6NIY4 337 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 AKR1B15C9JRZ8 316 aaPredicted RBP14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 NPHP4O75161 1426 aaPredicted RBP14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 MATR3P43243 847 aaKnown RBP eCLIP14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 AMPD2Q01433 879 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 RBL2Q08999 1139 aa14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
SLC28A1-203ENST00000394573 B4DLN1 442 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 CAPN15O75808 1086 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 PDIA5Q14554 519 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 MTRQ99707 1265 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 GORASP1Q9BQQ3 440 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 OSBPL1AQ9BXW6 950 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 DPPA5A6NC42 116 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 OPA1O60313 960 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 ATP1A1P05023 1023 aaKnown RBP14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 MARCKSP29966 332 aaPredicted RBP14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 TUBB4BP68371 445 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 ZNF827Q17R98 1081 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 AGAP11Q8TF27 550 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 BICD1Q96G01 975 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 SLF1Q9BQI6 1058 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 NCOA5Q9HCD5 579 aaKnown RBP14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 RBM47A0AV96 593 aaKnown RBP14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 M0R2C6 588 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 TUBP50607 506 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 ATP8B2P98198 1209 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
SLC28A1-203ENST00000394573 PLCH2O75038 1416 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 PFKFB1P16118 471 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 PAX3P23760 479 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 PSMA5P28066 241 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 DBN1Q16643 649 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 KCNV2Q8TDN2 545 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 ZIM3Q96PE6 472 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 UBE2OQ9C0C9 1292 aaKnown RBP14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 FAM184BQ9ULE4 1060 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 MAPK8IP1Q9UQF2 711 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 FERP16591 822 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 POLA2Q14181 598 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 AMOTQ4VCS5 1084 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 TBC1D1Q86TI0 1168 aaPredicted RBP14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 HVCN1Q96D96 273 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 SAMSN1Q9NSI8 373 aaKnown RBP14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 ZFATQ9P243 1243 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 DMGDHQ9UI17 866 aaKnown RBP14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 NFE2L3Q9Y4A8 694 aa14.04□□□□□ -0.16
SLC28A1-203ENST00000394573 H7C1W4 665 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 PDE2AO00408 941 aaPredicted RBP14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 FYB1O15117 783 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 HSF2BPO75031 334 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 FAM107AO95990 144 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 MCM3P25205 808 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 POLE2P56282 527 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 ANKRD1Q15327 319 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 CCDC178Q5BJE1 867 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 OLFM4Q6UX06 510 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 RBM12BQ8IXT5 1001 aaKnown RBP14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 SPICE1Q8N0Z3 855 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 AENQ8WTP8 325 aaKnown RBP14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 RUFY2Q8WXA3 655 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 NLRP3Q96P20 1036 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 OCEL1Q9H607 264 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 PANK4Q9NVE7 773 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 DNAAF2Q9NVR5 837 aaKnown RBP14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 NR1D1P20393 614 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 GCLCP48506 637 aaPredicted RBP14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 MXRA7P84157 204 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 IFFO1Q0D2I5 559 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 BLMHQ13867 455 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 TUBB2AQ13885 445 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 RHPN1Q8TCX5 695 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 TEKT4Q8WW24 435 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 PRCCQ92733 491 aaPredicted RBP14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 TUBB2BQ9BVA1 445 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 ARHGEF10LQ9HCE6 1279 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 C2CD2Q9Y426 696 aa14.03□□□□□ -0.16
SLC28A1-203ENST00000394573 FMR1Q06787 632 aaKnown RBP eCLIP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms