RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 NMT2O60551 498 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 DDAH1O94760 285 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 DACT2Q5SW24 774 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 SAP30BPQ9UHR5 308 aaKnown RBP17.41■□□□□ 0.38
CCT4-201ENST00000394440 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
CCT4-201ENST00000394440 BRCA1P38398 1863 aaKnown RBP17.41■□□□□ 0.38
CCT4-201ENST00000394440 F8W031 263 aaPredicted RBP17.4■□□□□ 0.38
CCT4-201ENST00000394440 POLR3DP05423 398 aaPredicted RBP17.4■□□□□ 0.38
CCT4-201ENST00000394440 KCNA3P22001 575 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 KIF23Q02241 960 aaPredicted RBP17.4■□□□□ 0.38
CCT4-201ENST00000394440 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
CCT4-201ENST00000394440 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 CRACR2BQ8N4Y2 399 aaPredicted RBP17.4■□□□□ 0.38
CCT4-201ENST00000394440 NUP133Q8WUM0 1156 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 SYAP1Q96A49 352 aaPredicted RBP17.4■□□□□ 0.38
CCT4-201ENST00000394440 SLC26A6Q9BXS9 759 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 UBE2Q2LH0YL09 131 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 FUT2Q10981 343 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 ANKS1AQ92625 1134 aa17.4■□□□□ 0.38
CCT4-201ENST00000394440 CALM1P0DP23 149 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 CALM2P0DP24 149 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 CALM3P0DP25 149 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 RASA1P20936 1047 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 AOC3Q16853 763 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 KRT40Q6A162 431 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 BRAPQ7Z569 592 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 SLC44A5Q8NCS7 719 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 SUPT20HQ8NEM7 779 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 USP28Q96RU2 1077 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 MRIQ9BWK5 157 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 IL17RBQ9NRM6 502 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 KIF28PB7ZC32 967 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
CCT4-201ENST00000394440 TFAP4Q01664 338 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 TTLL6Q8N841 843 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 RCOR1Q9UKL0 485 aa17.39■□□□□ 0.37
CCT4-201ENST00000394440 C21orf2O43822 256 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 ZBTB7AO95365 584 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 MRE11P49959 708 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 APOBEC3HQ6NTF7 200 aaKnown RBP17.38■□□□□ 0.37
CCT4-201ENST00000394440 DGKHQ86XP1 1220 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 WASF1Q92558 559 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 TEKT1Q969V4 418 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 ZNF396Q96N95 335 aaPredicted RBP17.38■□□□□ 0.37
CCT4-201ENST00000394440 RNF26Q9BY78 433 aaPredicted RBP17.38■□□□□ 0.37
CCT4-201ENST00000394440 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
CCT4-201ENST00000394440 DEXIO95424 95 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 GUCY1A2P33402 732 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 SCNN1DP51172 638 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 PGBD1Q96JS3 809 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 FTOQ9C0B1 505 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCT4-201ENST00000394440 GRPEL1Q9HAV7 217 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
CCT4-201ENST00000394440 DDX4Q9NQI0 724 aaKnown RBP17.38■□□□□ 0.37
CCT4-201ENST00000394440 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 SYCE3A1L190 88 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 XRCC6P12956 609 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCT4-201ENST00000394440 DPEP1P16444 411 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 CDK8P49336 464 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 HDLBPQ00341 1268 aaKnown RBP17.37■□□□□ 0.37
CCT4-201ENST00000394440 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 USP17L3A6NCW0 530 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 USP17L4A6NCW7 530 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 CRKP46108 304 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 CCDC178Q5BJE1 867 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 CCDC183Q5T5S1 534 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 MYSM1Q5VVJ2 828 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 LRSAM1Q6UWE0 723 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 USP17L1Q7RTZ2 530 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 CMTR1Q8N1G2 835 aaKnown RBP17.37■□□□□ 0.37
CCT4-201ENST00000394440 ZDHHC15Q96MV8 337 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 PSMD1Q99460 953 aa17.37■□□□□ 0.37
CCT4-201ENST00000394440 GREB1LQ9C091 1923 aaPredicted RBP17.36■□□□□ 0.37
CCT4-201ENST00000394440 CDC42EP5Q6NZY7 148 aa17.36■□□□□ 0.37
CCT4-201ENST00000394440 TMTC3Q6ZXV5 915 aa17.36■□□□□ 0.37
CCT4-201ENST00000394440 COL4A5P29400 1685 aa17.36■□□□□ 0.37
CCT4-201ENST00000394440 GABPAQ06546 454 aa17.36■□□□□ 0.37
CCT4-201ENST00000394440 ZNF444Q8N0Y2 327 aaPredicted RBP17.36■□□□□ 0.37
CCT4-201ENST00000394440 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
CCT4-201ENST00000394440 YDJCA8MPS7 323 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 PLEKHA8P1O95397 391 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 U2AF2P26368 475 aaKnown RBP eCLIP17.35■□□□□ 0.372e-22■■■■■ 36.9
CCT4-201ENST00000394440 USP40Q9NVE5 1235 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 PLIN4Q96Q06 1357 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 CNTNAP5Q8WYK1 1306 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 KIAA0825Q8IV33 1275 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 MAP3K14Q99558 947 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
CCT4-201ENST00000394440 FER1L6Q2WGJ9 1857 aa17.34■□□□□ 0.37
CCT4-201ENST00000394440 PRPF3O43395 683 aaKnown RBP17.34■□□□□ 0.37
CCT4-201ENST00000394440 TRIM29Q14134 588 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms