RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 GYS1P13807 737 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 COL9A3Q14050 684 aaPredicted RBP6.98□□□□□ -1.29
CASC3-202ENST00000394114 ADCK5Q3MIX3 580 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 CNBD1Q8NA66 436 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 LPIN2Q92539 896 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 COL24A1Q17RW2 1714 aa6.98□□□□□ -1.29
CASC3-202ENST00000394114 TNRC6CQ9HCJ0 1690 aaKnown RBP6.98□□□□□ -1.29
CASC3-202ENST00000394114 C19orf67A6NJJ6 358 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 IDH1O75874 414 aaKnown RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 SLC5A1P13866 664 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 BCAMP50895 628 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 SF3B3Q15393 1217 aaKnown RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 VPS53Q5VIR6 699 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 COL26A1Q96A83 441 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 GPSM3Q9Y4H4 160 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 MED23Q9ULK4 1368 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 CARMIL3Q8ND23 1372 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 DTNBO60941 627 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 FAM13AO94988 1023 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 F12P00748 615 aaPredicted RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 CYP2E1P05181 493 aaPredicted RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 CASTP20810 708 aaKnown RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 FGFR2P21802 821 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 GYG1P46976 350 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 MCMDC2Q4G0Z9 681 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 RNF187Q5TA31 235 aaPredicted RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 CREB3L3Q68CJ9 461 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 TCEANC2Q96MN5 208 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 JAKMIP1Q96N16 626 aaKnown RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 MRPL42Q9Y6G3 142 aaKnown RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 MYH7P12883 1935 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 RTL9Q8NET4 1388 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 M0R2C6 588 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 RNF113AO15541 343 aaKnown RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 NDUFB5O43674 189 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 FRAT2O75474 233 aaPredicted RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 IGHA2P01877 340 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 GTF2IP78347 998 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 PSMD2Q13200 908 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 RASGRF1Q13972 1273 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 NFKBIBQ15653 356 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 SLC10A5Q5PT55 438 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 PRR5LQ6MZQ0 368 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 MAP4K1Q92918 833 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 CITED4Q96RK1 184 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 OCSTAMPQ9BR26 566 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 PRKD2Q9BZL6 878 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 PIH1D3Q9NQM4 214 aaKnown RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 MAGEC2Q9UBF1 373 aaPredicted RBP6.97□□□□□ -1.29
CASC3-202ENST00000394114 MINPP1Q9UNW1 487 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 INPP5FQ9Y2H2 1132 aa6.97□□□□□ -1.29
CASC3-202ENST00000394114 MAST3O60307 1309 aa6.96□□□□□ -1.29
CASC3-202ENST00000394114 A0A0G2JLW4 131 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 SLC27A2O14975 620 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 SERPINB2P05120 415 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 KLRK1P26718 216 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 RPS8P62241 208 aaKnown RBP6.96□□□□□ -1.3
CASC3-202ENST00000394114 DDR1Q08345 913 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 EHHADHQ08426 723 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 BMS1Q14692 1282 aaKnown RBP6.96□□□□□ -1.3
CASC3-202ENST00000394114 NECTIN1Q15223 517 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 MSL1Q68DK7 614 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 MCF2L2Q86YR7 1114 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 ZGPATQ8N5A5 531 aaKnown RBP6.96□□□□□ -1.3
CASC3-202ENST00000394114 OSBP2Q969R2 916 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 HMG20BQ9P0W2 317 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 KCNG1Q9UIX4 513 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 ZKSCAN1P17029 563 aaPredicted RBP6.96□□□□□ -1.3
CASC3-202ENST00000394114 MAPK8P45983 427 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 ZMYM1Q5SVZ6 1142 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 SLC9C2Q5TAH2 1124 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 IFFO2Q5TF58 517 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 TPCN2Q8NHX9 752 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.96□□□□□ -1.3
CASC3-202ENST00000394114 TMX3Q96JJ7 454 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 PDGFDQ9GZP0 370 aaPredicted RBP6.96□□□□□ -1.3
CASC3-202ENST00000394114 WWC3Q9ULE0 1092 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
CASC3-202ENST00000394114 A0A1B0GUL6 1792 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 PLCB3Q01970 1234 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 COL23A1Q86Y22 540 aaPredicted RBP6.95□□□□□ -1.3
CASC3-202ENST00000394114 SPATA5Q8NB90 893 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
CASC3-202ENST00000394114 PUS7LQ9H0K6 701 aaKnown RBP6.95□□□□□ -1.3
CASC3-202ENST00000394114 BSDC1Q9NW68 430 aaPredicted RBP6.95□□□□□ -1.3
CASC3-202ENST00000394114 CHMP5Q9NZZ3 219 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 DDX41Q9UJV9 622 aaKnown RBP6.95□□□□□ -1.3
CASC3-202ENST00000394114 JAG2Q9Y219 1238 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 PCDHB9Q9Y5E1 797 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 ARAP2Q8WZ64 1704 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 CCDC194A0A1B0GVG4 234 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 FGRP09769 529 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 TM4SF1P30408 202 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 AK2P54819 239 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 TTLL5Q6EMB2 1281 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 VPS37DQ86XT2 251 aa6.95□□□□□ -1.3
CASC3-202ENST00000394114 RFX7Q2KHR2 1363 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 PLSCR1O15162 318 aa6.94□□□□□ -1.3
CASC3-202ENST00000394114 EPB41L2O43491 1005 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms