RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 SLC7A5Q01650 507 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 L1RE1Q9UN81 338 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 ZEB2O60315 1214 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 RANBP6O60518 1105 aaKnown RBP16.5■□□□□ 0.23
SFXN3-202ENST00000393459 CXCR5P32302 372 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 DSCC1Q9BVC3 393 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
SFXN3-202ENST00000393459 IFIT3O14879 490 aaKnown RBP16.49■□□□□ 0.23
SFXN3-202ENST00000393459 FOXP2O15409 715 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 GPTP24298 496 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 MED1Q15648 1581 aaPredicted RBP16.49■□□□□ 0.23
SFXN3-202ENST00000393459 KRI1Q8N9T8 703 aaKnown RBP16.49■□□□□ 0.23
SFXN3-202ENST00000393459 PXDNQ92626 1479 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 CSRNP2Q9H175 543 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 DEF6Q9H4E7 631 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 TUBE1Q9UJT0 475 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 ZBTB43O43298 467 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 MYBL2P10244 700 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 RNASE9P60153 205 aaKnown RBP16.49■□□□□ 0.23
SFXN3-202ENST00000393459 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 PCMTD1Q96MG8 357 aaPredicted RBP16.49■□□□□ 0.23
SFXN3-202ENST00000393459 BPIFA3Q9BQP9 254 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 UBXN6Q9BZV1 441 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 GGCXP38435 758 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 PTPAQ15257 358 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 DUSP10Q9Y6W6 482 aa16.49■□□□□ 0.23
SFXN3-202ENST00000393459 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 PTPROQ16827 1216 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 RAPGEF4Q8WZA2 1011 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 XAGE2Q96GT9 111 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 HELLSQ9NRZ9 838 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 ATP2C2O75185 946 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 HOXB7P09629 217 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 TDO2P48775 406 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 CYP27A1Q02318 531 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 SLC20A2Q08357 652 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
SFXN3-202ENST00000393459 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 OVOS2A0A0G2JMS6 1433 aa16.48■□□□□ 0.23
SFXN3-202ENST00000393459 MAP2K7O14733 419 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 SSBP05455 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 KRT9P35527 623 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 BRD3Q15059 726 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 ZNF174Q15697 407 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 RASSF8Q8NHQ8 419 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 AFAP1L1Q8TED9 768 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 GNL3LQ9NVN8 582 aaKnown RBP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 A0A087X0B3 334 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 H0YHG0 523 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 ERVK-24P63145 666 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 C2orf54Q08AI8 447 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 RESP18Q5W5W9 173 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 MB21D2Q8IYB1 491 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 NAPGQ99747 312 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 CRACR2AQ9BSW2 395 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 VPS54Q9P1Q0 977 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 KCND1Q9NSA2 647 aa16.47■□□□□ 0.23
SFXN3-202ENST00000393459 ANGEL1Q9UNK9 670 aaKnown RBP16.47■□□□□ 0.23
SFXN3-202ENST00000393459 KDM3BQ7LBC6 1761 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 ATP1A1P05023 1023 aaKnown RBP16.46■□□□□ 0.23
SFXN3-202ENST00000393459 MAP9Q49MG5 647 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 ANKRD13CQ8N6S4 541 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 CEP112Q8N8E3 955 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 MIGA1Q8NAN2 632 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 WNT7AO00755 349 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 GYPCP04921 128 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 IVLP07476 585 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 TOB1P50616 345 aaPredicted RBP16.46■□□□□ 0.23
SFXN3-202ENST00000393459 DPYDQ12882 1025 aa16.46■□□□□ 0.23
SFXN3-202ENST00000393459 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 TRIM49BA6NDI0 452 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 SAFBQ15424 915 aaKnown RBP eCLIP16.45■□□□□ 0.22
SFXN3-202ENST00000393459 ENOX2Q16206 610 aaKnown RBP16.45■□□□□ 0.22
SFXN3-202ENST00000393459 CCDC57Q2TAC2 916 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 RRAGBQ5VZM2 374 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 SH2D3CQ8N5H7 860 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 RRP36Q96EU6 259 aaKnown RBP16.45■□□□□ 0.22
SFXN3-202ENST00000393459 MYO6Q9UM54 1294 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 BACH1O14867 736 aa16.45■□□□□ 0.22
SFXN3-202ENST00000393459 PRKAB2O43741 272 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms