RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PCDHAC2Q9Y5I4 1007 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 PSMD14O00487 310 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 NMT2O60551 498 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 RAD17O75943 681 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 RBM5P52756 815 aaKnown RBP eCLIP20.42■□□□□ 0.86
MBD4-202ENST00000393278 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 CATIPQ7Z7H3 387 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 ZNF444Q8N0Y2 327 aaPredicted RBP20.42■□□□□ 0.86
MBD4-202ENST00000393278 TCP11L1Q9NUJ3 509 aa20.42■□□□□ 0.86
MBD4-202ENST00000393278 GOLGB1Q14789 3259 aaKnown RBP20.42■□□□□ 0.86
MBD4-202ENST00000393278 CCDC196A0A1B0GTZ2 297 aa20.41■□□□□ 0.86
MBD4-202ENST00000393278 PRPF40AO75400 957 aaKnown RBP20.41■□□□□ 0.86
MBD4-202ENST00000393278 CCDC178Q5BJE1 867 aa20.41■□□□□ 0.86
MBD4-202ENST00000393278 FERMT3Q86UX7 667 aa20.41■□□□□ 0.86
MBD4-202ENST00000393278 FANCBQ8NB91 859 aa20.41■□□□□ 0.86
MBD4-202ENST00000393278 NUP133Q8WUM0 1156 aa20.41■□□□□ 0.86
MBD4-202ENST00000393278 GMLQ99445 158 aa20.41■□□□□ 0.86
MBD4-202ENST00000393278 NFKBIEO00221 500 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 DDAH1O94760 285 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 TSPY3P0CV98 308 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 TSPY8P0CW00 308 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 IFNAR1P17181 557 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 GABPAQ06546 454 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 NFIAQ12857 509 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 RESTQ13127 1097 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 RCSD1Q6JBY9 416 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 DGKHQ86XP1 1220 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 IDI2Q9BXS1 227 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 BCS1LQ9Y276 419 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 STK36Q9NRP7 1315 aa20.4■□□□□ 0.86
MBD4-202ENST00000393278 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.86
MBD4-202ENST00000393278 CALM1P0DP23 149 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 CALM2P0DP24 149 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 CALM3P0DP25 149 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 FOSBP53539 338 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 TROAPQ12815 778 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 CFAP100Q494V2 611 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 TMEM87AQ8NBN3 555 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 RGS22Q8NE09 1264 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 ANKS1AQ92625 1134 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 ZSCAN16Q9H4T2 348 aaPredicted RBP20.39■□□□□ 0.86
MBD4-202ENST00000393278 IL17RBQ9NRM6 502 aa20.39■□□□□ 0.86
MBD4-202ENST00000393278 DNM1Q05193 864 aaKnown RBP20.38■□□□□ 0.85
MBD4-202ENST00000393278 PHKBQ93100 1093 aa20.38■□□□□ 0.85
MBD4-202ENST00000393278 C8orf76Q96K31 380 aa20.38■□□□□ 0.85
MBD4-202ENST00000393278 CNPY2Q9Y2B0 182 aa20.38■□□□□ 0.85
MBD4-202ENST00000393278 LTBP3Q9NS15 1303 aa20.38■□□□□ 0.85
MBD4-202ENST00000393278 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
MBD4-202ENST00000393278 HLA-DOAP06340 250 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 SSRP1Q08945 709 aaKnown RBP20.37■□□□□ 0.85
MBD4-202ENST00000393278 KLHL40Q2TBA0 621 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 FBXO18Q8NFZ0 1043 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 NEDD1Q8NHV4 660 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 SLC26A6Q9BXS9 759 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 GDPD2Q9HCC8 539 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 RBM28Q9NW13 759 aaKnown RBP20.37■□□□□ 0.85
MBD4-202ENST00000393278 FAM198AQ9UFP1 575 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 SERPINB13Q9UIV8 391 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 HDAC9Q9UKV0 1011 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 TCHHQ07283 1943 aa20.37■□□□□ 0.85
MBD4-202ENST00000393278 CACNB3P54284 484 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 CXCL9Q07325 125 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 NBPF11Q86T75 865 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 USP48Q86UV5 1035 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 AGBL3Q8NEM8 1001 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 NLGN2Q8NFZ4 835 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 ALG1Q9BT22 464 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 SWAP70Q9UH65 585 aa20.36■□□□□ 0.85
MBD4-202ENST00000393278 DDX49Q9Y6V7 483 aaKnown RBP20.36■□□□□ 0.85
MBD4-202ENST00000393278 NCLP19338 710 aaKnown RBP20.35■□□□□ 0.85
MBD4-202ENST00000393278 ZFPM1Q8IX07 1006 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 CRACR2BQ8N4Y2 399 aaPredicted RBP20.35■□□□□ 0.85
MBD4-202ENST00000393278 JDP2Q8WYK2 163 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 PRMT6Q96LA8 375 aaPredicted RBP20.35■□□□□ 0.85
MBD4-202ENST00000393278 EHD4Q9H223 541 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 DHX36Q9H2U1 1008 aaKnown RBP20.35■□□□□ 0.85
MBD4-202ENST00000393278 TDRD3Q9H7E2 651 aaKnown RBP20.35■□□□□ 0.85
MBD4-202ENST00000393278 KAT14Q9H8E8 782 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 SPON1Q9HCB6 807 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 ZBTB12Q9Y330 459 aaPredicted RBP20.35■□□□□ 0.85
MBD4-202ENST00000393278 PLIN4Q96Q06 1357 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 KRT85P78386 507 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 FAM173BQ6P4H8 233 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 TRIM22Q8IYM9 498 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 WASF1Q92558 559 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 ARFGEF1Q9Y6D6 1849 aa20.35■□□□□ 0.85
MBD4-202ENST00000393278 SPDYE2BA6NHP3 402 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 FIBPO43427 364 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 SPDYE6P0CI01 402 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 CSPP1Q1MSJ5 1256 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 CIAPIN1Q6FI81 312 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 OTUD7BQ6GQQ9 843 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 OGFOD1Q8N543 542 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 AIFM3Q96NN9 605 aa20.34■□□□□ 0.85
MBD4-202ENST00000393278 SRCAPQ6ZRS2 3230 aa20.33■□□□□ 0.85
MBD4-202ENST00000393278 ENTPD3O75355 529 aa20.33■□□□□ 0.85
MBD4-202ENST00000393278 NOVP48745 357 aa20.33■□□□□ 0.85
MBD4-202ENST00000393278 FUT2Q10981 343 aa20.33■□□□□ 0.85
MBD4-202ENST00000393278 TCP10Q12799 353 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms