RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 COL11A1P12107 1806 aaPredicted RBP12.75□□□□□ -0.37
PDGFD-202ENST00000393158 CDK8P49336 464 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 FAM47AQ5JRC9 791 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 MYOZ2Q9NPC6 264 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 TCP11L1Q9NUJ3 509 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
PDGFD-202ENST00000393158 GMPSP49915 693 aaPredicted RBP12.75□□□□□ -0.37
PDGFD-202ENST00000393158 CCDC83Q8IWF9 413 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 ZNF70Q9UC06 446 aaPredicted RBP12.75□□□□□ -0.37
PDGFD-202ENST00000393158 TNKSO95271 1327 aa12.74□□□□□ -0.37
PDGFD-202ENST00000393158 LMNB1P20700 586 aa12.74□□□□□ -0.37
PDGFD-202ENST00000393158 BECN1Q14457 450 aa12.74□□□□□ -0.37
PDGFD-202ENST00000393158 CIAPIN1Q6FI81 312 aa12.74□□□□□ -0.37
PDGFD-202ENST00000393158 TRPM4Q8TD43 1214 aa12.74□□□□□ -0.37
PDGFD-202ENST00000393158 DPF2Q92785 391 aa12.74□□□□□ -0.37
PDGFD-202ENST00000393158 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
PDGFD-202ENST00000393158 TMX4Q9H1E5 349 aaPredicted RBP12.74□□□□□ -0.37
PDGFD-202ENST00000393158 SOCS7O14512 581 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
PDGFD-202ENST00000393158 CNNM2Q9H8M5 875 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 FAM196BA6NMK8 535 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 BRD1O95696 1058 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 PLCG2P16885 1265 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 PICALMQ13492 652 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 SAMD7Q7Z3H4 446 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 TMEM87BQ96K49 555 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 SH2B1Q9NRF2 756 aaPredicted RBP12.73□□□□□ -0.37
PDGFD-202ENST00000393158 PHF20L1A8MW92 1017 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 KRT23Q9C075 422 aa12.73□□□□□ -0.37
PDGFD-202ENST00000393158 LCTP09848 1927 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 RXRAP19793 462 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 RAB11FIP4Q86YS3 637 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 RPS12P25398 132 aaKnown RBP12.72□□□□□ -0.37
PDGFD-202ENST00000393158 USP5P45974 858 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 FKBP1CQ5VVH2 108 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 GPC2Q8N158 579 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 GPRC5DQ9NZD1 345 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 A0A0G2JMZ2 1700 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 AKR1B1P15121 316 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 VEGFAP15692 232 aaPredicted RBP12.72□□□□□ -0.37
PDGFD-202ENST00000393158 STK3Q13188 491 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
PDGFD-202ENST00000393158 ENTPD3O75355 529 aa12.71□□□□□ -0.37
PDGFD-202ENST00000393158 ADD1P35611 737 aaKnown RBP12.71□□□□□ -0.37
PDGFD-202ENST00000393158 TMEM39BQ9GZU3 492 aa12.71□□□□□ -0.37
PDGFD-202ENST00000393158 TCP10Q12799 353 aa12.71□□□□□ -0.37
PDGFD-202ENST00000393158 ANKRD1Q15327 319 aa12.71□□□□□ -0.37
PDGFD-202ENST00000393158 ZSCAN31Q96LW9 406 aaPredicted RBP12.71□□□□□ -0.37
PDGFD-202ENST00000393158 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
PDGFD-202ENST00000393158 RBBP6Q7Z6E9 1792 aaKnown RBP12.71□□□□□ -0.37
PDGFD-202ENST00000393158 CLRN2A0PK11 232 aa12.71□□□□□ -0.38
PDGFD-202ENST00000393158 SYT1P21579 422 aa12.71□□□□□ -0.38
PDGFD-202ENST00000393158 EPS15P42566 896 aa12.71□□□□□ -0.38
PDGFD-202ENST00000393158 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.38
PDGFD-202ENST00000393158 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 GJB2P29033 226 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 PKN1Q16512 942 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 DLK2Q6UY11 383 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 PPFIA3O75145 1194 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 CCT2P78371 535 aaKnown RBP12.7□□□□□ -0.38
PDGFD-202ENST00000393158 NPY5RQ15761 445 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 CEP95Q96GE4 821 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.7□□□□□ -0.38
PDGFD-202ENST00000393158 CNOT7Q9UIV1 285 aaKnown RBP12.7□□□□□ -0.38
PDGFD-202ENST00000393158 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
PDGFD-202ENST00000393158 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 L3MBTL3Q96JM7 780 aaPredicted RBP12.7□□□□□ -0.38
PDGFD-202ENST00000393158 MAD2L2Q9UI95 211 aa12.7□□□□□ -0.38
PDGFD-202ENST00000393158 CYTH3O43739 400 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 TFAP4Q01664 338 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 KIAA1755Q5JYT7 1200 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 FAM83AQ86UY5 434 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
PDGFD-202ENST00000393158 RCAN1P53805 252 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 ESR2Q92731 530 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 AIFM3Q96NN9 605 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
PDGFD-202ENST00000393158 TMEM67Q5HYA8 995 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
PDGFD-202ENST00000393158 FAM151AQ8WW52 585 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
PDGFD-202ENST00000393158 TNIP1Q15025 636 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 RRP12Q5JTH9 1297 aaKnown RBP12.68□□□□□ -0.38
PDGFD-202ENST00000393158 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 CMTR1Q8N1G2 835 aaKnown RBP12.68□□□□□ -0.38
PDGFD-202ENST00000393158 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 G3V3G9 751 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 DCAF8Q5TAQ9 597 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 LLPHQ9BRT6 129 aaKnown RBP12.68□□□□□ -0.38
PDGFD-202ENST00000393158 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
PDGFD-202ENST00000393158 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms