RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 APPBP2Q92624 585 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 AS3MTQ9HBK9 375 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 ZBTB21Q9ULJ3 1066 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 GDF11O95390 407 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 NUCB1Q02818 461 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 GABPAQ06546 454 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 PROCA1Q8NCQ7 364 aaPredicted RBP14.24□□□□□ -0.13
RFC4-202ENST00000392481 OSBP2Q969R2 916 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 STRBPQ96SI9 672 aaKnown RBP14.24□□□□□ -0.13
RFC4-202ENST00000392481 SLC45A1Q9Y2W3 748 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 SLC4A4Q9Y6R1 1079 aa14.24□□□□□ -0.13
RFC4-202ENST00000392481 CAPN15O75808 1086 aa14.23□□□□□ -0.13
RFC4-202ENST00000392481 SHMT1P34896 483 aa14.23□□□□□ -0.13
RFC4-202ENST00000392481 SHROOM1Q2M3G4 852 aaPredicted RBP14.23□□□□□ -0.13
RFC4-202ENST00000392481 CERKLQ49MI3 558 aaPredicted RBP14.23□□□□□ -0.13
RFC4-202ENST00000392481 B4GALNT3Q6L9W6 998 aa14.23□□□□□ -0.13
RFC4-202ENST00000392481 CHD1LQ86WJ1 897 aa14.23□□□□□ -0.13
RFC4-202ENST00000392481 PARK7Q99497 189 aaKnown RBP14.23□□□□□ -0.13
RFC4-202ENST00000392481 FSD1Q9BTV5 496 aa14.23□□□□□ -0.13
RFC4-202ENST00000392481 BAZ2AQ9UIF9 1905 aaKnown RBP14.22□□□□□ -0.13
RFC4-202ENST00000392481 GH2P01242 217 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 CYP2D6P10635 497 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 HMGCS2P54868 508 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 BACE1P56817 501 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 IRX6P78412 446 aaPredicted RBP14.22□□□□□ -0.13
RFC4-202ENST00000392481 ARHGEF6Q15052 776 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 SH3D19Q5HYK7 790 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 C17orf99Q6UX52 265 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 CD99L2Q8TCZ2 262 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 AGTPBP1Q9UPW5 1226 aa14.22□□□□□ -0.13
RFC4-202ENST00000392481 ADGRA2Q96PE1 1338 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 HTTP42858 3142 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 C19orf81C9J6K1 198 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 USP17L12C9JPN9 530 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 USP17L21D6R901 530 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 GNAT2P19087 354 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 EVX2Q03828 476 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 ABCB5Q2M3G0 1257 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 GIMAP6Q6P9H5 292 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 FBXO46Q6PJ61 603 aaPredicted RBP14.21□□□□□ -0.13
RFC4-202ENST00000392481 OTOP1Q7RTM1 612 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 EVI5LQ96CN4 794 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 EFCC1Q9HA90 598 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 CABP5Q9NP86 173 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 SWAP70Q9UH65 585 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 TRIM17Q9Y577 477 aa14.21□□□□□ -0.13
RFC4-202ENST00000392481 LOC285556D6RIA3 1793 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 USP17L10C9JJH3 530 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 GPAA1O43292 621 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 CYP2C8P10632 490 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 LACTBP83111 547 aaPredicted RBP14.2□□□□□ -0.14
RFC4-202ENST00000392481 PABPC4Q13310 644 aaKnown RBP eCLIP14.2□□□□□ -0.141e-8■■■■■ 40.1
RFC4-202ENST00000392481 MTMR2Q13614 643 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 KIF22Q14807 665 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 TREML2Q5T2D2 321 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 TICAM2Q86XR7 235 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 CPA4Q9UI42 421 aa14.2□□□□□ -0.14
RFC4-202ENST00000392481 CYP2D7A0A087X1C5 515 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 CCDC85CA6NKD9 419 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 M0R2C6 588 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 BCRP11274 1271 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 CAP1Q01518 475 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 SBK1Q52WX2 424 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 CTR9Q6PD62 1173 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 SLC44A5Q8NCS7 719 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 DYNLL2Q96FJ2 89 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 OSBPL3Q9H4L5 887 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 TMOD4Q9NZQ9 345 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 ARPP21Q9UBL0 812 aaPredicted RBP14.19□□□□□ -0.14
RFC4-202ENST00000392481 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
RFC4-202ENST00000392481 RAB3GAP1Q15042 981 aa14.18□□□□□ -0.14
RFC4-202ENST00000392481 C16orf86Q6ZW13 317 aa14.18□□□□□ -0.14
RFC4-202ENST00000392481 PLEKHM2Q8IWE5 1019 aa14.18□□□□□ -0.14
RFC4-202ENST00000392481 SMCR8Q8TEV9 937 aaPredicted RBP14.18□□□□□ -0.14
RFC4-202ENST00000392481 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
RFC4-202ENST00000392481 MYH8P13535 1937 aa14.18□□□□□ -0.14
RFC4-202ENST00000392481 PATL2C9JE40 543 aaKnown RBP14.17□□□□□ -0.14
RFC4-202ENST00000392481 GNRH1P01148 92 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 OSBPP22059 807 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 HOXA7P31268 230 aaPredicted RBP14.17□□□□□ -0.14
RFC4-202ENST00000392481 GUCY1A2P33402 732 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 CDK8P49336 464 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 USP17L2Q6R6M4 530 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 CCDC17Q96LX7 622 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 SEC62Q99442 399 aaKnown RBP14.17□□□□□ -0.14
RFC4-202ENST00000392481 KIAA1683Q9H0B3 1180 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 PTPN22Q9Y2R2 807 aa14.17□□□□□ -0.14
RFC4-202ENST00000392481 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
RFC4-202ENST00000392481 MPHOSPH10O00566 681 aaKnown RBP14.16□□□□□ -0.14
RFC4-202ENST00000392481 APPP05067 770 aa14.16□□□□□ -0.14
RFC4-202ENST00000392481 GCLCP48506 637 aaPredicted RBP14.16□□□□□ -0.14
RFC4-202ENST00000392481 USP14P54578 494 aa14.16□□□□□ -0.14
RFC4-202ENST00000392481 SEPT2Q15019 361 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms