RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 PDIA3P30101 505 aaKnown RBP23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 SCNN1DP51172 638 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 ATL3Q6DD88 541 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 TGFBRAP1Q8WUH2 860 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 STAG1Q8WVM7 1258 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 NOL10Q9BSC4 688 aaKnown RBP23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 MCM9Q9NXL9 1143 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 H3BQV1 296 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 CTAGE5O15320 804 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 USP17L8P0C7I0 530 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 ZNF165P49910 485 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 RASSF7Q02833 373 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 IFFO2Q5TF58 517 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 PKNOX2Q96KN3 472 aa23.03■■□□□ 1.28
CSNK1D-203ENST00000392334 BAZ2AQ9UIF9 1905 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-203ENST00000392334 KLF18A0A0U1RQI7 1052 aa23.02■■□□□ 1.28
CSNK1D-203ENST00000392334 CCDC186Q7Z3E2 898 aa23.02■■□□□ 1.28
CSNK1D-203ENST00000392334 DDX11Q96FC9 970 aa23.02■■□□□ 1.28
CSNK1D-203ENST00000392334 ATP8A2Q9NTI2 1148 aa23.02■■□□□ 1.28
CSNK1D-203ENST00000392334 RCOR1Q9UKL0 485 aa23.02■■□□□ 1.28
CSNK1D-203ENST00000392334 TTF2Q9UNY4 1162 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-203ENST00000392334 CTIFO43310 598 aaKnown RBP23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 ADD1P35611 737 aaKnown RBP23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 IARSP41252 1262 aaKnown RBP23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 SARM1Q6SZW1 724 aa23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 MAST2Q6P0Q8 1798 aa23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 MAPKAPK5Q8IW41 473 aa23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 TRIM5Q9C035 493 aa23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 KRT23Q9C075 422 aa23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 CNNM2Q9H8M5 875 aa23.01■■□□□ 1.27
CSNK1D-203ENST00000392334 RIOK3O14730 519 aaKnown RBP23■■□□□ 1.27
CSNK1D-203ENST00000392334 RXRAP19793 462 aa23■■□□□ 1.27
CSNK1D-203ENST00000392334 PRELPP51888 382 aa23■■□□□ 1.27
CSNK1D-203ENST00000392334 NSUN7Q8NE18 718 aaKnown RBP23■■□□□ 1.27
CSNK1D-203ENST00000392334 SAP30BPQ9UHR5 308 aaKnown RBP23■■□□□ 1.27
CSNK1D-203ENST00000392334 ANGEL1Q9UNK9 670 aaKnown RBP23■■□□□ 1.27
CSNK1D-203ENST00000392334 TMEM67Q5HYA8 995 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 TMED8Q6PL24 325 aaPredicted RBP22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 IGDCC4Q8TDY8 1250 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 TSC1Q92574 1164 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 RNF41Q9H4P4 317 aaPredicted RBP22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 ANAPC4Q9UJX5 808 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 ZNF646O15015 1829 aaPredicted RBP22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 MYH2Q9UKX2 1941 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 GPR75-ASB3A0A0A6YYF3 556 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 GOLGA8BA8MQT2 603 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 SH2B2O14492 632 aaPredicted RBP22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 IFIT3O14879 490 aaKnown RBP22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 PPP4CP60510 307 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 FBXL16Q8N461 479 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 ZNF274Q96GC6 653 aaPredicted RBP22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 DNAJC25Q9H1X3 360 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 DAGLAQ9Y4D2 1042 aa22.99■■□□□ 1.27
CSNK1D-203ENST00000392334 RANBP6O60518 1105 aaKnown RBP22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 IQCB1Q15051 598 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 KIAA0825Q8IV33 1275 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 TEX11Q8IYF3 940 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 ANKRD7Q92527 254 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 CHMP4CQ96CF2 233 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 MYL10Q9BUA6 226 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 USP17L3A6NCW0 530 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 USP17L4A6NCW7 530 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 RAD17O75943 681 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 CTDNEP1O95476 244 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 DACT2Q5SW24 774 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 NFXL1Q6ZNB6 911 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 USP17L1Q7RTZ2 530 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 CCDC144CPQ8IYA2 1237 aa22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 MKRN1Q9UHC7 482 aaKnown RBP22.98■■□□□ 1.27
CSNK1D-203ENST00000392334 SYCP1Q15431 976 aa22.97■■□□□ 1.27
CSNK1D-203ENST00000392334 DRC7Q8IY82 874 aa22.97■■□□□ 1.27
CSNK1D-203ENST00000392334 LY9Q9HBG7 655 aa22.97■■□□□ 1.27
CSNK1D-203ENST00000392334 HPS5Q9UPZ3 1129 aa22.97■■□□□ 1.27
CSNK1D-203ENST00000392334 WDR19Q8NEZ3 1342 aa22.97■■□□□ 1.27
CSNK1D-203ENST00000392334 RHBDL3P58872 404 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 ARHGAP27Q6ZUM4 889 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 SLF2Q8IX21 1173 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 DYNLL2Q96FJ2 89 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 ARPP21Q9UBL0 812 aaPredicted RBP22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 GAKO14976 1311 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 YBX3P16989 372 aaKnown RBP eCLIP22.96■■□□□ 1.272e-6■■■□□ 15.1
CSNK1D-203ENST00000392334 FOSBP53539 338 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 EVCP57679 992 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 STX1AQ16623 288 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 NIM1KQ8IY84 436 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 FAM163AQ96GL9 167 aaPredicted RBP22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 MRFAP1L1Q96HT8 127 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 TMEM87BQ96K49 555 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 ZNF396Q96N95 335 aaPredicted RBP22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 VPS33BQ9H267 617 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 PCDHAC2Q9Y5I4 1007 aa22.96■■□□□ 1.27
CSNK1D-203ENST00000392334 PTPDC1A2A3K4 754 aa22.95■■□□□ 1.26
CSNK1D-203ENST00000392334 PLCD1P51178 756 aa22.95■■□□□ 1.26
CSNK1D-203ENST00000392334 FAM47AQ5JRC9 791 aa22.95■■□□□ 1.26
CSNK1D-203ENST00000392334 MICU3Q86XE3 530 aa22.95■■□□□ 1.26
CSNK1D-203ENST00000392334 ESR2Q92731 530 aa22.95■■□□□ 1.26
CSNK1D-203ENST00000392334 CLIP2Q9UDT6 1046 aa22.95■■□□□ 1.26
CSNK1D-203ENST00000392334 NRBP1Q9UHY1 535 aa22.95■■□□□ 1.26
CSNK1D-203ENST00000392334 NEMFO60524 1076 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms