RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 MVPQ14764 893 aaKnown RBP9.04□□□□□ -0.96
TRBV28-201ENST00000390400 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 ZSCAN30Q86W11 494 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 TMEM57Q8N5G2 664 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 SNX21Q969T3 373 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 CFHR5Q9BXR6 569 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 NIF3L1Q9GZT8 377 aa9.04□□□□□ -0.96
TRBV28-201ENST00000390400 NIP7Q9Y221 180 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRBV28-201ENST00000390400 A6NHS1 94 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 NEURL1BA8MQ27 555 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 DYNC1I1O14576 645 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 IGKV5-2P06315 115 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 GYS1P13807 737 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 TRIM28Q13263 835 aaKnown RBP9.03□□□□□ -0.96
TRBV28-201ENST00000390400 R3HDM1Q15032 1099 aaKnown RBP9.03□□□□□ -0.96
TRBV28-201ENST00000390400 CWF19L2Q2TBE0 894 aaKnown RBP9.03□□□□□ -0.96
TRBV28-201ENST00000390400 PARP10Q53GL7 1025 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 ZNF34Q8IZ26 560 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 GJD3Q8N144 294 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 CCDC191Q8NCU4 936 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 DUSP9Q99956 384 aaKnown RBP9.03□□□□□ -0.96
TRBV28-201ENST00000390400 ISCA1Q9BUE6 129 aa9.03□□□□□ -0.96
TRBV28-201ENST00000390400 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRBV28-201ENST00000390400 CWC25Q9NXE8 425 aaPredicted RBP9.03□□□□□ -0.96
TRBV28-201ENST00000390400 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
TRBV28-201ENST00000390400 PDGFAP04085 211 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 LDHBP07195 334 aaKnown RBP9.02□□□□□ -0.97
TRBV28-201ENST00000390400 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
TRBV28-201ENST00000390400 GCKRQ14397 625 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 NFIXQ14938 502 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 C11orf91Q3C1V1 193 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 TBC1D9BQ66K14 1250 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 ALKBH2Q6NS38 261 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 ZNF598Q86UK7 904 aaKnown RBP9.02□□□□□ -0.97
TRBV28-201ENST00000390400 NLRP10Q86W26 655 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 EDEM1Q92611 657 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 CITED4Q96RK1 184 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 CHMP4BQ9H444 224 aaKnown RBP9.02□□□□□ -0.97
TRBV28-201ENST00000390400 PARP2Q9UGN5 583 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 DDX19BQ9UMR2 479 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 ZNF232Q9UNY5 417 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 COL24A1Q17RW2 1714 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 UBN2Q6ZU65 1347 aa9.02□□□□□ -0.97
TRBV28-201ENST00000390400 CASZ1Q86V15 1759 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 CARMIL3Q8ND23 1372 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 GOLGA6L22H0YM25 854 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 GDF9O60383 454 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 BRD2P25440 801 aaKnown RBP9.01□□□□□ -0.97
TRBV28-201ENST00000390400 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
TRBV28-201ENST00000390400 RTN1Q16799 776 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 IFT43Q96FT9 208 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 UTP14AQ9BVJ6 771 aaKnown RBP9.01□□□□□ -0.97
TRBV28-201ENST00000390400 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
TRBV28-201ENST00000390400 C9orf78Q9NZ63 289 aaPredicted RBP9.01□□□□□ -0.97
TRBV28-201ENST00000390400 FAM177BA6PVY3 158 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 GRM8O00222 908 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 NPHP1O15259 732 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 KIF20AO95235 890 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 PCCAP05165 728 aaPredicted RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 GNAI3P08754 354 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 MMP10P09238 476 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 UBTFL1P0CB47 393 aaPredicted RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 ZAP70P43403 619 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 SUSD4Q5VX71 490 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 UBE3BQ7Z3V4 1068 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 NBPF5PQ86XG9 351 aaPredicted RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 SNIP1Q8TAD8 396 aaKnown RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 ALKBH8Q96BT7 664 aaKnown RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 ZSCAN10Q96SZ4 725 aaPredicted RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 MEIS3Q99687 375 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 PDGFDQ9GZP0 370 aaPredicted RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 NYXQ9GZU5 481 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 USP44Q9H0E7 712 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 TRMT112Q9UI30 125 aaKnown RBP9□□□□□ -0.97
TRBV28-201ENST00000390400 HDAC5Q9UQL6 1122 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 WASF2Q9Y6W5 498 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 SH3TC1Q8TE82 1336 aa9□□□□□ -0.97
TRBV28-201ENST00000390400 H7C1W4 665 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 NTSR2O95665 410 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
TRBV28-201ENST00000390400 SMPD1P17405 629 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 MSNP26038 577 aaKnown RBP8.99□□□□□ -0.97
TRBV28-201ENST00000390400 MZF1P28698 734 aaPredicted RBP8.99□□□□□ -0.97
TRBV28-201ENST00000390400 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
TRBV28-201ENST00000390400 TM4SF1P30408 202 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 DDIT3P35638 169 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 DDR1Q08345 913 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 C4orf17Q53FE4 359 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 SMC5Q8IY18 1101 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 CNBD1Q8NA66 436 aa8.99□□□□□ -0.97
TRBV28-201ENST00000390400 DMRTB1Q96MA1 342 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms