RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 LDHCP07864 332 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 ATP2B2Q01814 1243 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 MAP2K5Q13163 448 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 GJC2Q5T442 439 aaPredicted RBP11.95□□□□□ -0.5
IFT88-203ENST00000389373 TEX11Q8IYF3 940 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 BADQ92934 168 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 WDR18Q9BV38 432 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
IFT88-203ENST00000389373 TTYH1Q9H313 450 aaPredicted RBP11.95□□□□□ -0.5
IFT88-203ENST00000389373 DDX20Q9UHI6 824 aaKnown RBP11.95□□□□□ -0.5
IFT88-203ENST00000389373 UNC80Q8N2C7 3258 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 C19orf81C9J6K1 198 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 USP17L10C9JJH3 530 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 GLRX3O76003 335 aaKnown RBP11.94□□□□□ -0.5
IFT88-203ENST00000389373 GDF11O95390 407 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 IL15P40933 162 aaPredicted RBP11.94□□□□□ -0.5
IFT88-203ENST00000389373 GSTO1P78417 241 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 ANO1Q5XXA6 986 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 TBC1D9Q6ZT07 1266 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 CRACR2BQ8N4Y2 399 aaPredicted RBP11.94□□□□□ -0.5
IFT88-203ENST00000389373 MRS2Q9HD23 443 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 FLRT1Q9NZU1 646 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
IFT88-203ENST00000389373 HERC5Q9UII4 1024 aaKnown RBP11.94□□□□□ -0.5
IFT88-203ENST00000389373 COL2A1P02458 1487 aaPredicted RBP11.94□□□□□ -0.5
IFT88-203ENST00000389373 PTPRCP08575 1304 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
IFT88-203ENST00000389373 ASNSP08243 561 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 UBTFL1P0CB47 393 aaPredicted RBP11.93□□□□□ -0.5
IFT88-203ENST00000389373 CYP2C19P33261 490 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 JAG1P78504 1218 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
IFT88-203ENST00000389373 ZYXQ15942 572 aaKnown RBP11.93□□□□□ -0.5
IFT88-203ENST00000389373 SHROOM1Q2M3G4 852 aaPredicted RBP11.93□□□□□ -0.5
IFT88-203ENST00000389373 SLC39A5Q6ZMH5 540 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 SH3RF3Q8TEJ3 882 aaPredicted RBP11.93□□□□□ -0.5
IFT88-203ENST00000389373 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 LPAR1Q92633 364 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 NEUROD6Q96NK8 337 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
IFT88-203ENST00000389373 PI4KBQ9UBF8 816 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
IFT88-203ENST00000389373 LOC285556D6RIA3 1793 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 KBTBD13C9JR72 458 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 DNM1LO00429 736 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 MSCO60682 206 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 CCNA1P78396 465 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 TJAP1Q5JTD0 557 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 NPLOC4Q8TAT6 608 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 GTF3C2Q8WUA4 911 aaPredicted RBP11.92□□□□□ -0.5
IFT88-203ENST00000389373 PPM1EQ8WY54 764 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
IFT88-203ENST00000389373 A0A1B0GUL7 405 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 SLC15A5A6NIM6 579 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 MAP4K4O95819 1239 aaPredicted RBP11.91□□□□□ -0.5
IFT88-203ENST00000389373 PTPREP23469 700 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
IFT88-203ENST00000389373 TRIM60Q495X7 471 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 USP17L2Q6R6M4 530 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 PI16Q6UXB8 463 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 SH3RF1Q7Z6J0 888 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 ARRDC4Q8NCT1 418 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 TGFBRAP1Q8WUH2 860 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 FERMT2Q96AC1 680 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 NSUN4Q96CB9 384 aaKnown RBP11.91□□□□□ -0.5
IFT88-203ENST00000389373 RNPC3Q96LT9 517 aaKnown RBP11.91□□□□□ -0.5
IFT88-203ENST00000389373 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 HMG20BQ9P0W2 317 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 LRP2BPQ9P2M1 347 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
IFT88-203ENST00000389373 TMEM265A0A087WTH1 108 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 CNMDO75829 334 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 TFCP2Q12800 502 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 DPP9Q86TI2 863 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 USP38Q8NB14 1042 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 TRPV1Q8NER1 839 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 SSH1Q8WYL5 1049 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 FEZ1Q99689 392 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 DHX36Q9H2U1 1008 aaKnown RBP11.9□□□□□ -0.5
IFT88-203ENST00000389373 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.5
IFT88-203ENST00000389373 SAP30BPQ9UHR5 308 aaKnown RBP11.9□□□□□ -0.5
IFT88-203ENST00000389373 ZBTB21Q9ULJ3 1066 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 AKAP2Q9Y2D5 859 aa11.9□□□□□ -0.5
IFT88-203ENST00000389373 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
IFT88-203ENST00000389373 ATAD5Q96QE3 1844 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 TRIM43BA6NCK2 446 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 BAG3O95817 575 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms