RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 CPXCR1Q8N123 301 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 FBF1Q8TES7 1133 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 COL26A1Q96A83 441 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 MPHOSPH9Q99550 1183 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 CENPOQ9BU64 300 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 CCDC113Q9H0I3 377 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 RBSNQ9H1K0 784 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 LGR6Q9HBX8 967 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 GINM1Q9NU53 330 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 RABGAP1Q9Y3P9 1069 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 RREB1Q92766 1687 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 FSHRP23945 695 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 GUCY2FP51841 1108 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 NEK2P51955 445 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 NNTQ13423 1086 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 CDC37Q16543 378 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-202ENST00000389138 DGKHQ86XP1 1220 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 VPS37AQ8NEZ2 397 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 NELL1Q92832 810 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 SKA1Q96BD8 255 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 NUDT16Q96DE0 195 aaKnown RBP6.92□□□□□ -1.3
ERCC4-202ENST00000389138 GPR101Q96P66 508 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-202ENST00000389138 SEZ6LQ9BYH1 1024 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 ST7Q9NRC1 585 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 C1orf167Q5SNV9 1468 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 SOS2Q07890 1332 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-202ENST00000389138 USP32Q8NFA0 1604 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 FAM187AA6NFU0 413 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 ZBTB39O15060 712 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 NBNO60934 754 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 MYCLP1P12525 358 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-202ENST00000389138 PKDCCQ504Y2 493 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 C2orf27AQ580R0 203 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 FAM26DQ5JW98 314 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 MORC1Q86VD1 984 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 SMAP1Q8IYB5 467 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-202ENST00000389138 CCDC116Q8IYX3 515 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 JPH3Q8WXH2 748 aaPredicted RBP6.92□□□□□ -1.3
ERCC4-202ENST00000389138 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 KBTBD4Q9NVX7 518 aa6.92□□□□□ -1.3
ERCC4-202ENST00000389138 NUP188Q5SRE5 1749 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ABCA3Q99758 1704 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 SLIT2O94813 1529 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 SENP3-EIF4A1A0A087X0R7 540 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 AVPP01185 164 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 PGRP06401 933 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 HALP42357 657 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 NEXNQ0ZGT2 675 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 MLC1Q15049 377 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 TCEA2Q15560 299 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 INTS6LQ5JSJ4 861 aaKnown RBP6.91□□□□□ -1.3
ERCC4-202ENST00000389138 LVRNQ6Q4G3 990 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ATCAYQ86WG3 371 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 TCEAL8Q8IYN2 117 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 MPP4Q96JB8 637 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 NELL2Q99435 816 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 OSBPL7Q9BZF2 842 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ISY1Q9ULR0 285 aaKnown RBP6.91□□□□□ -1.3
ERCC4-202ENST00000389138 OPLAHO14841 1288 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 APOBRQ0VD83 1088 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ORC1Q13415 861 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 MTMR1Q13613 665 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 CTC1Q2NKJ3 1217 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 CCDC92Q53HC0 331 aaPredicted RBP6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ANKRD23Q86SG2 305 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 RNF180Q86T96 592 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 CLASRPQ8N2M8 674 aaKnown RBP6.91□□□□□ -1.3
ERCC4-202ENST00000389138 CHAC2Q8WUX2 184 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 SMAD5Q99717 465 aaKnown RBP6.91□□□□□ -1.3
ERCC4-202ENST00000389138 PRKAG3Q9UGI9 489 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ADAMTS1Q9UHI8 967 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 GTF2A1LQ9UNN4 478 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 E9PCH4 1651 aa6.91□□□□□ -1.3
ERCC4-202ENST00000389138 ADGRB2O60241 1585 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 UTRNP46939 3433 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 KLRG2A4D1S0 409 aaPredicted RBP6.9□□□□□ -1.3
ERCC4-202ENST00000389138 A6NCN8 305 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 HTR3AP46098 478 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 BAG6P46379 1132 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 PPM1FP49593 454 aaPredicted RBP6.9□□□□□ -1.3
ERCC4-202ENST00000389138 R3HDM1Q15032 1099 aaKnown RBP6.9□□□□□ -1.3
ERCC4-202ENST00000389138 TBC1D10BQ4KMP7 808 aaPredicted RBP6.9□□□□□ -1.3
ERCC4-202ENST00000389138 HYIQ5T013 277 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 FAM102BQ5T8I3 360 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 MAGEB6Q8N7X4 407 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 JMYQ8N9B5 988 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 PPHLN1Q8NEY8 458 aaKnown RBP6.9□□□□□ -1.3
ERCC4-202ENST00000389138 SELENOOQ9BVL4 669 aa6.9□□□□□ -1.3
ERCC4-202ENST00000389138 CCDC8Q9H0W5 538 aaPredicted RBP6.9□□□□□ -1.3
ERCC4-202ENST00000389138 CEP350Q5VT06 3117 aa6.9□□□□□ -1.31
ERCC4-202ENST00000389138 PXDNQ92626 1479 aa6.9□□□□□ -1.31
ERCC4-202ENST00000389138 NRAPQ86VF7 1730 aa6.9□□□□□ -1.31
ERCC4-202ENST00000389138 F6X3S4 739 aa6.89□□□□□ -1.31
ERCC4-202ENST00000389138 IRS4O14654 1257 aaPredicted RBP6.89□□□□□ -1.31
ERCC4-202ENST00000389138 PDPK1O15530 556 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms