RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 OTUD7AQ8TE49 926 aaPredicted RBP13.71□□□□□ -0.22
KCNQ3-201ENST00000388996 RNF34Q969K3 372 aa13.71□□□□□ -0.22
KCNQ3-201ENST00000388996 TNFAIP3P21580 790 aa13.71□□□□□ -0.22
KCNQ3-201ENST00000388996 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.22
KCNQ3-201ENST00000388996 FLOT1O75955 427 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 V9GY48 417 aaPredicted RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 ERCC5P28715 1186 aaPredicted RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 STIM2Q9P246 746 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 NCAPH2Q6IBW4 605 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 H0YIN7 160 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 PPANQ9NQ55 473 aaKnown RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 MAP2P11137 1827 aaKnown RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 TBC1D8BQ0IIM8 1120 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 ACTN4O43707 911 aaKnown RBP13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 PRDM1O75626 825 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 KDM5DQ9BY66 1539 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 USH1GQ495M9 461 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 PDE4DQ08499 809 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 HSPA2P54652 639 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 CLSTN2Q9H4D0 955 aa13.7□□□□□ -0.22
KCNQ3-201ENST00000388996 CETN3O15182 167 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 HPDP32754 393 aaPredicted RBP13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 NEO1Q92859 1461 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 ZWINTO95229 277 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 TAOK1Q7L7X3 1001 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 NBPF11Q86T75 865 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 PFDN4Q9NQP4 134 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 TTF2Q9UNY4 1162 aaKnown RBP13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 GINS2Q9Y248 185 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 NOL3O60936 208 aaKnown RBP13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 CCDC110Q8TBZ0 833 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 ARID1BQ8NFD5 2236 aaPredicted RBP13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 CARD14Q9BXL6 1004 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 MKRN1Q9UHC7 482 aaKnown RBP13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 C8orf74Q6P047 294 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 HAUS2Q9NVX0 235 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 G2E3Q7L622 706 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 SUPT20HQ8NEM7 779 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 GABPAQ06546 454 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 AFAP1L2Q8N4X5 818 aa13.69□□□□□ -0.22
KCNQ3-201ENST00000388996 IL13P35225 146 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 GCKRQ14397 625 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 SYT10Q6XYQ8 523 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 USP19O94966 1318 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 CEP152O94986 1710 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 TPD52P55327 224 aaPredicted RBP13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 TUBB2AQ13885 445 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 GEN1Q17RS7 908 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 LPIN2Q92539 896 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 TUBB2BQ9BVA1 445 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 INTS8Q75QN2 995 aaKnown RBP13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 DAAM2Q86T65 1068 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 GABPB2Q8TAK5 448 aaPredicted RBP13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 TBC1D7Q9P0N9 293 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 ARID1AO14497 2285 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 CTDSPL2Q05D32 466 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 ITIH3Q06033 890 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 NELFBQ8WX92 580 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 LAMC1P11047 1609 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 SSH2Q76I76 1423 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 I3L4J1 428 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 ZBED4O75132 1171 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 HSPA1LP34931 641 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 PDE6BP35913 854 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 NACA2Q9H009 215 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 POSTNQ15063 836 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 ZCCHC11Q5TAX3 1644 aaKnown RBP13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 P4HA1P13674 534 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 DCUN1D2Q6PH85 259 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 KLHDC4Q8TBB5 520 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 PHKBQ93100 1093 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 DNM3Q9UQ16 869 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 CLCN1P35523 988 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 LACTBP83111 547 aaPredicted RBP13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 ERCC6LQ2NKX8 1250 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 KBTBD3Q8NAB2 608 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 DBNDD2Q9BQY9 259 aa13.68□□□□□ -0.22
KCNQ3-201ENST00000388996 ZNF202O95125 648 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 ZYXQ15942 572 aaKnown RBP13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 SYCE1Q8N0S2 351 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 NONOQ15233 471 aaKnown RBP eCLIP13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 M0QZ92 97 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 TAF5LO75529 589 aa13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 ARID4AP29374 1257 aaPredicted RBP13.67□□□□□ -0.22
KCNQ3-201ENST00000388996 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms