RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 LRMPQ12912 555 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 MMS22LQ6ZRQ5 1243 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 FBXO41Q8TF61 875 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 PSDA5PKW4 1024 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 GSTO1P78417 241 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 MRFAP1Q9Y605 127 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 LDHCP07864 332 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 PDE4DQ08499 809 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 ACTR5Q9H9F9 607 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 TMOD3Q9NYL9 352 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 MPRIPQ6WCQ1 1025 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 CALUO43852 315 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 MAGEA1P43355 309 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 CCDC84Q86UT8 332 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 CFAP61Q8NHU2 1237 aa13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 GABPB2Q8TAK5 448 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-202ENST00000383836 GRM8O00222 908 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 SFMBT2Q5VUG0 894 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 EMILIN1Q9Y6C2 1016 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 MX2P20592 715 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 POLE2P56282 527 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 KIFC2Q96AC6 838 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 HYOU1Q9Y4L1 999 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 GIPC1O14908 333 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 CNGA1P29973 690 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 PHBP35232 272 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 STK10O94804 968 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 CA8P35219 290 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 MAIP1Q8WWC4 291 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 NELFBQ8WX92 580 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 PLIN2Q99541 437 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 KAT6AQ92794 2004 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 RASA3Q14644 834 aa13.73□□□□□ -0.21
SRGAP3-202ENST00000383836 CDK13Q14004 1512 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 CCDC152Q4G0S7 254 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 CCDC89Q8N998 374 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 TAF11Q15544 211 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 MSH6P52701 1360 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 CCDC169A6NNP5 214 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 KRIT1O00522 736 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 SLMAPQ14BN4 828 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 LONRF2Q1L5Z9 754 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 LRRC43Q8N309 656 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 GPT2Q8TD30 523 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 DESI2Q9BSY9 194 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 ZC4H2Q9NQZ6 224 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 SKIP12755 728 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 ESRRGP62508 458 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 DRC3Q9H069 523 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 TERF2Q15554 542 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 SLC9C2Q5TAH2 1124 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 SAAL1Q96ER3 474 aa13.72□□□□□ -0.21
SRGAP3-202ENST00000383836 AOX1Q06278 1338 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 NR1I2O75469 434 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 HAUS8Q9BT25 410 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 TAB2Q9NYJ8 693 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 AMFRQ9UKV5 643 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 DNMT1P26358 1616 aaKnown RBP13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 PLXNC1O60486 1568 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 ZPR1O75312 459 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 ZNF174Q15697 407 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 CFAP74Q9C0B2 1584 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 KCTD16Q68DU8 428 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 NAA16Q6N069 864 aaPredicted RBP13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 CHPF2Q9P2E5 772 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 SLC27A2O14975 620 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 STX10O60499 249 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 SCINQ9Y6U3 715 aa13.71□□□□□ -0.21
SRGAP3-202ENST00000383836 CREB3O43889 395 aa13.71□□□□□ -0.22
SRGAP3-202ENST00000383836 BRD1O95696 1058 aa13.71□□□□□ -0.22
SRGAP3-202ENST00000383836 GUCY2CP25092 1073 aa13.71□□□□□ -0.22
SRGAP3-202ENST00000383836 KLHL30Q0D2K2 578 aa13.71□□□□□ -0.22
SRGAP3-202ENST00000383836 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.22
SRGAP3-202ENST00000383836 YY1AP1Q9H869 796 aa13.71□□□□□ -0.22
SRGAP3-202ENST00000383836 TXLNGQ9NUQ3 528 aa13.71□□□□□ -0.22
SRGAP3-202ENST00000383836 TRIM6Q9C030 488 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms