RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 LRRC10BA6NIK2 292 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 IGHA2P01877 340 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 LIG1P18858 919 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 MCM5P33992 734 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 CBX1P83916 185 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 GABPB1Q06547 395 aaPredicted RBP4.31□□□□□ -1.72
RFX3-203ENST00000381984 EXOSC6Q5RKV6 272 aaKnown RBP4.31□□□□□ -1.72
RFX3-203ENST00000381984 DUSP27Q5VZP5 1158 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 SMG8Q8ND04 991 aaKnown RBP4.31□□□□□ -1.72
RFX3-203ENST00000381984 DDX54Q8TDD1 881 aaKnown RBP4.31□□□□□ -1.72
RFX3-203ENST00000381984 KCNB2Q92953 911 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 TIGD1Q96MW7 591 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 TMPRSS13Q9BYE2 586 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 CBX8Q9HC52 389 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 TRAK1Q9UPV9 953 aa4.31□□□□□ -1.72
RFX3-203ENST00000381984 NCOA2Q15596 1464 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 NINLQ9Y2I6 1382 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 CAPN2P17655 700 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 FUT4P22083 530 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 MSNP26038 577 aaKnown RBP4.3□□□□□ -1.72
RFX3-203ENST00000381984 RRP1P56182 461 aaKnown RBP4.3□□□□□ -1.72
RFX3-203ENST00000381984 SETQ01105 290 aaPredicted RBP4.3□□□□□ -1.72
RFX3-203ENST00000381984 LMOD3Q0VAK6 560 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 FAAP100Q0VG06 881 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 ATP2B3Q16720 1220 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 HSP90AB3PQ58FF7 597 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 TPTE2Q6XPS3 522 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 MYRIPQ8NFW9 859 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 EXOC6Q8TAG9 804 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 TRIM56Q9BRZ2 755 aaKnown RBP4.3□□□□□ -1.72
RFX3-203ENST00000381984 TRAIPQ9BWF2 469 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 KIF3AQ9Y496 699 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 GOLGA3Q08378 1498 aa4.3□□□□□ -1.72
RFX3-203ENST00000381984 CLIP1P30622 1438 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 SCAPERQ9BY12 1400 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 TREHO43280 583 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 RNGTTO60942 597 aaKnown RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 TSPAN15O95858 294 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 NFICP08651 508 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 GTF2F1P35269 517 aaKnown RBP eCLIP4.29□□□□□ -1.72
RFX3-203ENST00000381984 ASPAP45381 313 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 ATP2B2Q01814 1243 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 SATB1Q01826 763 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 SOX4Q06945 474 aaPredicted RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 ENOX2Q16206 610 aaKnown RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 MLANAQ16655 118 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 CCDC184Q52MB2 194 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 ZNF765Q7L2R6 523 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 ZNF771Q7L3S4 317 aaPredicted RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 ANKLE2Q86XL3 938 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 STK11IPQ8N1F8 1099 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 LRRN4CLQ8ND94 238 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 EZH1Q92800 747 aaPredicted RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 ALKBH8Q96BT7 664 aaKnown RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 WDR89Q96FK6 387 aaPredicted RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 ACSBG1Q96GR2 724 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 C20orf173Q96LM9 149 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 SOX17Q9H6I2 414 aaPredicted RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 SUGCTQ9HAC7 445 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 CALCOCO1Q9P1Z2 691 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 NOL7Q9UMY1 257 aaKnown RBP4.29□□□□□ -1.72
RFX3-203ENST00000381984 DAGLAQ9Y4D2 1042 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 CSADQ9Y600 493 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 ACTL7BQ9Y614 415 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 FHAD1B1AJZ9 1412 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 CNTLNQ9NXG0 1405 aa4.29□□□□□ -1.72
RFX3-203ENST00000381984 KTN1Q86UP2 1357 aaKnown RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 ZNF503-AS2A6NEH8 195 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 B3GALT4O96024 378 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 KRT1P04264 644 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 LDHBP07195 334 aaKnown RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 P4HBP07237 508 aaKnown RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 INHBBP09529 407 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 CD8BP10966 210 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 ADH5P11766 374 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 ITPKAP23677 461 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 RBM25P49756 843 aaKnown RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 MFAP1P55081 439 aaKnown RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 CTSWP56202 376 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 PPP2R3AQ06190 1150 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 DSC3Q14574 896 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 MAP1SQ66K74 1059 aaPredicted RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 CTR9Q6PD62 1173 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 AMIGO3Q86WK7 504 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 C2CD4AQ8NCU7 369 aaPredicted RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 CHMP4CQ96CF2 233 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 PUS7Q96PZ0 661 aaKnown RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 MYCBPQ99417 103 aaPredicted RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 FEZ1Q99689 392 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 CCDC86Q9H6F5 360 aaKnown RBP4.28□□□□□ -1.72
RFX3-203ENST00000381984 FAM53CQ9NYF3 392 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 RAI14Q9P0K7 980 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 CEP83Q9Y592 693 aa4.28□□□□□ -1.72
RFX3-203ENST00000381984 IBTKQ9P2D0 1353 aaPredicted RBP4.27□□□□□ -1.73
RFX3-203ENST00000381984 USP19O94966 1318 aa4.27□□□□□ -1.73
RFX3-203ENST00000381984 ERICH3Q5RHP9 1530 aa4.27□□□□□ -1.73
RFX3-203ENST00000381984 LOC102724159A0A0B4J2E5 919 aa4.27□□□□□ -1.73
RFX3-203ENST00000381984 TTC36A6NLP5 189 aa4.27□□□□□ -1.73
RFX3-203ENST00000381984 IGSF3O75054 1194 aa4.27□□□□□ -1.73
RFX3-203ENST00000381984 AOC2O75106 756 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 1025.7 ms