RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 R3HCC1Q9Y3T6 440 aaKnown RBP14.53□□□□□ -0.08
CIITA-202ENST00000381835 SH2B2O14492 632 aaPredicted RBP14.52□□□□□ -0.08
CIITA-202ENST00000381835 ORC4O43929 436 aa14.52□□□□□ -0.08
CIITA-202ENST00000381835 ST3GAL1Q11201 340 aa14.52□□□□□ -0.08
CIITA-202ENST00000381835 FAM47AQ5JRC9 791 aa14.52□□□□□ -0.08
CIITA-202ENST00000381835 IGDCC4Q8TDY8 1250 aa14.52□□□□□ -0.08
CIITA-202ENST00000381835 UBAC1Q9BSL1 405 aa14.52□□□□□ -0.08
CIITA-202ENST00000381835 SENP2Q9HC62 589 aa14.52□□□□□ -0.08
CIITA-202ENST00000381835 ZKSCAN5Q9Y2L8 839 aa14.52□□□□□ -0.08
CIITA-202ENST00000381835 ROBO3Q96MS0 1386 aa14.52□□□□□ -0.09
CIITA-202ENST00000381835 ZNF541Q9H0D2 1346 aa14.52□□□□□ -0.09
CIITA-202ENST00000381835 KLF18A0A0U1RQI7 1052 aa14.52□□□□□ -0.09
CIITA-202ENST00000381835 CLRN2A0PK11 232 aa14.52□□□□□ -0.09
CIITA-202ENST00000381835 CCT2P78371 535 aaKnown RBP14.52□□□□□ -0.09
CIITA-202ENST00000381835 SART3Q15020 963 aaKnown RBP14.52□□□□□ -0.09
CIITA-202ENST00000381835 ZFPM1Q8IX07 1006 aa14.52□□□□□ -0.09
CIITA-202ENST00000381835 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.52□□□□□ -0.09
CIITA-202ENST00000381835 ERICH2A1L162 156 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 TSPY2A6NKD2 308 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 GMPSP49915 693 aaPredicted RBP14.51□□□□□ -0.09
CIITA-202ENST00000381835 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 TTC6Q86TZ1 520 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 RAB11FIP4Q86YS3 637 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 CCDC39Q9UFE4 941 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 FAM198AQ9UFP1 575 aa14.51□□□□□ -0.09
CIITA-202ENST00000381835 PDIA3P30101 505 aaKnown RBP14.5□□□□□ -0.09
CIITA-202ENST00000381835 ZSCAN29Q8IWY8 852 aaPredicted RBP14.5□□□□□ -0.09
CIITA-202ENST00000381835 RNF214Q8ND24 703 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 GTF3C6Q969F1 213 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 ZNF274Q96GC6 653 aaPredicted RBP14.5□□□□□ -0.09
CIITA-202ENST00000381835 MYOZ2Q9NPC6 264 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 TMOD2Q9NZR1 351 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 TNKSO95271 1327 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 MYH8P13535 1937 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 RPS12P25398 132 aaKnown RBP14.5□□□□□ -0.09
CIITA-202ENST00000381835 CDK8P49336 464 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 SCRN1Q12765 414 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 WTAPQ15007 396 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
CIITA-202ENST00000381835 C16orf86Q6ZW13 317 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 IQCA1Q86XH1 822 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 ZNF444Q8N0Y2 327 aaPredicted RBP14.5□□□□□ -0.09
CIITA-202ENST00000381835 SMC3Q9UQE7 1217 aa14.5□□□□□ -0.09
CIITA-202ENST00000381835 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 TCP10L2B9ZVM9 353 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 PFKFB2O60825 505 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 LIFRP42702 1097 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 MICALL2Q8IY33 904 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 SYAP1Q96A49 352 aaPredicted RBP14.49□□□□□ -0.09
CIITA-202ENST00000381835 VEZTQ9HBM0 779 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 ZNF287Q9HBT7 754 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 NCOA5Q9HCD5 579 aaKnown RBP14.49□□□□□ -0.09
CIITA-202ENST00000381835 RNF181Q9P0P0 153 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 DDTLA6NHG4 134 aaPredicted RBP14.49□□□□□ -0.09
CIITA-202ENST00000381835 CCDC69A6NI79 296 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 NMT2O60551 498 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 HLA-DOAP06340 250 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 EVCP57679 992 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 TFAP4Q01664 338 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 GPR162Q16538 588 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 CSPP1Q1MSJ5 1256 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 NBPF9Q3BBW0 867 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 ZSCAN10Q96SZ4 725 aaPredicted RBP14.49□□□□□ -0.09
CIITA-202ENST00000381835 TSPY26PQ9H489 355 aa14.49□□□□□ -0.09
CIITA-202ENST00000381835 ZNF70Q9UC06 446 aaPredicted RBP14.49□□□□□ -0.09
CIITA-202ENST00000381835 CNOT7Q9UIV1 285 aaKnown RBP14.49□□□□□ -0.09
CIITA-202ENST00000381835 WNT10BO00744 389 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 EGFRP00533 1210 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 RXRAP19793 462 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 RASA1P20936 1047 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 APOA5Q6Q788 366 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 ENAHQ8N8S7 591 aaPredicted RBP14.48□□□□□ -0.09
CIITA-202ENST00000381835 MTMR14Q8NCE2 650 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 DPF2Q92785 391 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 MYL10Q9BUA6 226 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 SERPINB13Q9UIV8 391 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 MYO1BO43795 1136 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 TSPY3P0CV98 308 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 TSPY8P0CW00 308 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 SLURP2P0DP57 97 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 RBM10P98175 930 aaKnown RBP14.48□□□□□ -0.09
CIITA-202ENST00000381835 SAMD7Q7Z3H4 446 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 SGMS1Q86VZ5 419 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 MICU3Q86XE3 530 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 MTA3Q9BTC8 594 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 DHX36Q9H2U1 1008 aaKnown RBP14.48□□□□□ -0.09
CIITA-202ENST00000381835 SLC12A7Q9Y666 1083 aa14.48□□□□□ -0.09
CIITA-202ENST00000381835 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
CIITA-202ENST00000381835 GJB2P29033 226 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 ZNF280AP59817 542 aaPredicted RBP14.47□□□□□ -0.09
CIITA-202ENST00000381835 SEC23AQ15436 765 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 FOXD4L6Q3SYB3 417 aaPredicted RBP14.47□□□□□ -0.09
CIITA-202ENST00000381835 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 FOXD4L3Q6VB84 417 aaPredicted RBP14.47□□□□□ -0.09
CIITA-202ENST00000381835 SH3BP5LQ7L8J4 393 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 CCDC144CPQ8IYA2 1237 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 HPS5Q9UPZ3 1129 aa14.47□□□□□ -0.09
CIITA-202ENST00000381835 ENTPD3O75355 529 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms