RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TCIRG1Q13488 830 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 LEO1Q8WVC0 666 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 MTA3Q9BTC8 594 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 SMIM24O75264 130 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF804AQ7Z570 1209 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 CATSPER1Q8NEC5 780 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 TRIM58Q8NG06 486 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 EXOC1Q9NV70 894 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 MYH15Q9Y2K3 1946 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 VGLL3A8MV65 326 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ALDH1L1O75891 902 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ABCD1P33897 745 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ORC2Q13416 577 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 TRIM42Q8IWZ5 723 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 RPUSD2Q8IZ73 545 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 RAB17Q9H0T7 212 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF280CQ8ND82 737 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ZBTB3Q9H5J0 574 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 HOMER2Q9NSB8 354 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 NPATQ14207 1427 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 LRRD1A4D1F6 860 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 RWDD2BP57060 319 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF444Q8N0Y2 327 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 POP5Q969H6 163 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 TRIM4Q9C037 500 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 NYXQ9GZU5 481 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 GJA3Q9Y6H8 435 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 NCAPD2Q15021 1401 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 NCKAP5LQ9HCH0 1330 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 RASGRF2O14827 1237 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 BRD1O95696 1058 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 IL2RBP14784 551 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 PPP2R5AQ15172 486 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 MAP7D1Q3KQU3 841 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 SMYD5Q6GMV2 418 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 YTHDF3Q7Z739 585 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 CCDC144CPQ8IYA2 1237 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 HOOK2Q96ED9 719 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 MYD88Q99836 296 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 DNAJC25Q9H1X3 360 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 C14orf93Q9H972 538 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF148Q9UQR1 794 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ANO9A1A5B4 782 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 ERICH4A6NGS2 130 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 TROVE2P10155 538 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 NOP2P46087 812 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 TNNI2P48788 182 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 EIF6P56537 245 aaKnown RBP5.44□□□□□ -1.54
PTPRD-203ENST00000381196 KIF22Q14807 665 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 FAM192AQ9GZU8 254 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 HYPKQ9NX55 129 aa5.44□□□□□ -1.54
PTPRD-203ENST00000381196 PPFIA2O75334 1257 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 HSPA8P11142 646 aaKnown RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 EVCP57679 992 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 SWT1Q5T5J6 900 aaKnown RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ZNF772Q68DY9 489 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 KRBA2Q6ZNG9 492 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 TTLL7Q6ZT98 887 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ANKRD44Q8N8A2 993 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ZCRB1Q8TBF4 217 aaKnown RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 FAM81BQ96LP2 452 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 LNPKQ9C0E8 428 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 CUEDC2Q9H467 287 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 OSBPL3Q9H4L5 887 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ANAPC4Q9UJX5 808 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 CALM1P0DP23 149 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 CALM2P0DP24 149 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 CALM3P0DP25 149 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ARHGEF6Q15052 776 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 STMN2Q93045 179 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 CAPZA3Q96KX2 299 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 DCTPP1Q9H773 170 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ZRANB1Q9UGI0 708 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 EPHB4P54760 987 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 MYL5Q02045 173 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 MAGEC3Q8TD91 643 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 MRPL40Q9NQ50 206 aaKnown RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 CCNL1Q9UK58 526 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 NOD1Q9Y239 953 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 BZW2Q9Y6E2 419 aaKnown RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 LPXNO60711 386 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 HIP1RO75146 1068 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 SYT1P21579 422 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ERCC5P28715 1186 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 ADRM1Q16186 407 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 BRDTQ58F21 947 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 GABPB2Q8TAK5 448 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 GNPATO15228 680 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 EXOSC9Q06265 439 aaKnown RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 TRAPPC3LQ5T215 181 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 GJC2Q5T442 439 aaPredicted RBP5.43□□□□□ -1.54
PTPRD-203ENST00000381196 NEK1Q96PY6 1258 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 BCL2L12Q9HB09 334 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 NDE1Q9NXR1 346 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 IKBKGQ9Y6K9 419 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 GNA14O95837 355 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 GUCY2CP25092 1073 aa5.43□□□□□ -1.54
PTPRD-203ENST00000381196 TUBA4AP68366 448 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms