RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 FAM173BQ6P4H8 233 aa12.78□□□□□ -0.36
FAM239A-201ENST00000381108 PHKBQ93100 1093 aa12.78□□□□□ -0.36
FAM239A-201ENST00000381108 DDX4Q9NQI0 724 aaKnown RBP12.78□□□□□ -0.36
FAM239A-201ENST00000381108 ORC3Q9UBD5 711 aaPredicted RBP12.78□□□□□ -0.36
FAM239A-201ENST00000381108 CNPY2Q9Y2B0 182 aa12.78□□□□□ -0.36
FAM239A-201ENST00000381108 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 ECM29Q5VYK3 1845 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 WDHD1O75717 1129 aaPredicted RBP12.77□□□□□ -0.36
FAM239A-201ENST00000381108 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.36
FAM239A-201ENST00000381108 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.36
FAM239A-201ENST00000381108 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 ZNF654Q8IZM8 581 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 CHMP4CQ96CF2 233 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 LMBRD1Q9NUN5 540 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 KIF3AQ9Y496 699 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.36
FAM239A-201ENST00000381108 FIBPO43427 364 aa12.77□□□□□ -0.37
FAM239A-201ENST00000381108 TFAP4Q01664 338 aa12.77□□□□□ -0.37
FAM239A-201ENST00000381108 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
FAM239A-201ENST00000381108 HHIPL2Q6UWX4 724 aa12.77□□□□□ -0.37
FAM239A-201ENST00000381108 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.37
FAM239A-201ENST00000381108 CCDC82Q8N4S0 544 aa12.77□□□□□ -0.37
FAM239A-201ENST00000381108 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
FAM239A-201ENST00000381108 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
FAM239A-201ENST00000381108 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.37
FAM239A-201ENST00000381108 NFIAQ12857 509 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 RTN1Q16799 776 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 FAM43AQ8N2R8 423 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 TMTC2Q8N394 836 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
FAM239A-201ENST00000381108 PSME4Q14997 1843 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 CDKL5O76039 1030 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 PTGER2P43116 358 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
FAM239A-201ENST00000381108 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 CPLX2Q6PUV4 134 aaKnown RBP12.76□□□□□ -0.37
FAM239A-201ENST00000381108 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
FAM239A-201ENST00000381108 UBE2Q2LH0YL09 131 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 PSMD14O00487 310 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
FAM239A-201ENST00000381108 TCP10Q12799 353 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
FAM239A-201ENST00000381108 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 SLC26A6Q9BXS9 759 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 TAOK3Q9H2K8 898 aa12.75□□□□□ -0.37
FAM239A-201ENST00000381108 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
FAM239A-201ENST00000381108 IARSP41252 1262 aaKnown RBP12.74□□□□□ -0.37
FAM239A-201ENST00000381108 CDK8P49336 464 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 NTRK3Q16288 839 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 USP48Q86UV5 1035 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 FER1L6Q2WGJ9 1857 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 RASA1P20936 1047 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 NLGN2Q8NFZ4 835 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 OSBPL5Q9H0X9 879 aaPredicted RBP12.74□□□□□ -0.37
FAM239A-201ENST00000381108 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 IL17RBQ9NRM6 502 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 MYH8P13535 1937 aa12.74□□□□□ -0.37
FAM239A-201ENST00000381108 RESTQ13127 1097 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 KLHL40Q2TBA0 621 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 CFAP100Q494V2 611 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
FAM239A-201ENST00000381108 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 STX8Q9UNK0 236 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 MTMR7Q9Y216 660 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 CD2APQ9Y5K6 639 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 NID2Q14112 1375 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
FAM239A-201ENST00000381108 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 TTC6Q86TZ1 520 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 TDRD3Q9H7E2 651 aaKnown RBP12.73□□□□□ -0.37
FAM239A-201ENST00000381108 ZNRF3Q9ULT6 936 aa12.73□□□□□ -0.37
FAM239A-201ENST00000381108 CCDC196A0A1B0GTZ2 297 aa12.72□□□□□ -0.37
FAM239A-201ENST00000381108 NFKBIEO00221 500 aa12.72□□□□□ -0.37
FAM239A-201ENST00000381108 KRT85P78386 507 aa12.72□□□□□ -0.37
FAM239A-201ENST00000381108 HDLBPQ00341 1268 aaKnown RBP12.72□□□□□ -0.37
FAM239A-201ENST00000381108 SSRP1Q08945 709 aaKnown RBP12.72□□□□□ -0.37
FAM239A-201ENST00000381108 TROAPQ12815 778 aa12.72□□□□□ -0.37
FAM239A-201ENST00000381108 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
FAM239A-201ENST00000381108 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
FAM239A-201ENST00000381108 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
FAM239A-201ENST00000381108 MYH15Q9Y2K3 1946 aa12.72□□□□□ -0.37
FAM239A-201ENST00000381108 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 IFNAR1P17181 557 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 GUCY1A2P33402 732 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 RASSF7Q02833 373 aa12.71□□□□□ -0.37
FAM239A-201ENST00000381108 CAVIN1Q6NZI2 390 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms