RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 SREBF2Q12772 1141 aa17.75■□□□□ 0.43
VCX3B-201ENST00000381029 IFNL3Q8IZI9 196 aa17.75■□□□□ 0.43
VCX3B-201ENST00000381029 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
VCX3B-201ENST00000381029 SLC44A5Q8NCS7 719 aa17.75■□□□□ 0.43
VCX3B-201ENST00000381029 DYNLL2Q96FJ2 89 aa17.75■□□□□ 0.43
VCX3B-201ENST00000381029 GINM1Q9NU53 330 aa17.75■□□□□ 0.43
VCX3B-201ENST00000381029 ZHX2Q9Y6X8 837 aa17.75■□□□□ 0.43
VCX3B-201ENST00000381029 CXCL11O14625 94 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 CA12O43570 354 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 GUCY1A2P33402 732 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 C16orf86Q6ZW13 317 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 PICK1Q9NRD5 415 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 ARPP21Q9UBL0 812 aaPredicted RBP17.74■□□□□ 0.43
VCX3B-201ENST00000381029 ZBTB21Q9ULJ3 1066 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 ATAD5Q96QE3 1844 aa17.74■□□□□ 0.43
VCX3B-201ENST00000381029 A0A0G2JLL6 359 aaPredicted RBP17.73■□□□□ 0.43
VCX3B-201ENST00000381029 GDF11O95390 407 aa17.73■□□□□ 0.43
VCX3B-201ENST00000381029 ASNSP08243 561 aa17.73■□□□□ 0.43
VCX3B-201ENST00000381029 SNAPC2Q13487 334 aa17.73■□□□□ 0.43
VCX3B-201ENST00000381029 ALX1Q15699 326 aa17.73■□□□□ 0.43
VCX3B-201ENST00000381029 PRRT2Q7Z6L0 340 aaPredicted RBP17.73■□□□□ 0.43
VCX3B-201ENST00000381029 WDR18Q9BV38 432 aa17.73■□□□□ 0.43
VCX3B-201ENST00000381029 R3HDMLQ9H3Y0 253 aa17.73■□□□□ 0.43
VCX3B-201ENST00000381029 PTPRFP10586 1907 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 CCL15-CCL14A0A0B4J2E2 113 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 TRPA1O75762 1119 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 CDK8P49336 464 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 CTCFP49711 727 aaPredicted RBP17.72■□□□□ 0.43
VCX3B-201ENST00000381029 CCL15Q16663 113 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 GPAT2Q6NUI2 795 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 PPP4R2Q9NY27 417 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 SWAP70Q9UH65 585 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 CCDC171Q6TFL3 1326 aa17.72■□□□□ 0.43
VCX3B-201ENST00000381029 USP17L5A8MUK1 530 aa17.71■□□□□ 0.43
VCX3B-201ENST00000381029 BTBD19C9JJ37 291 aa17.71■□□□□ 0.43
VCX3B-201ENST00000381029 GH2P01242 217 aa17.71■□□□□ 0.43
VCX3B-201ENST00000381029 HSPD1P10809 573 aaKnown RBP17.71■□□□□ 0.43
VCX3B-201ENST00000381029 CETPP11597 493 aa17.71■□□□□ 0.43
VCX3B-201ENST00000381029 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
VCX3B-201ENST00000381029 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
VCX3B-201ENST00000381029 TACC3Q9Y6A5 838 aa17.71■□□□□ 0.43
VCX3B-201ENST00000381029 ZMYM6O95789 1325 aa17.71■□□□□ 0.42
VCX3B-201ENST00000381029 HIP1O00291 1037 aa17.7■□□□□ 0.42
VCX3B-201ENST00000381029 CHMLP26374 656 aa17.7■□□□□ 0.42
VCX3B-201ENST00000381029 LBX1P52954 281 aa17.7■□□□□ 0.42
VCX3B-201ENST00000381029 SH3D19Q5HYK7 790 aa17.7■□□□□ 0.42
VCX3B-201ENST00000381029 CWC27Q6UX04 472 aaKnown RBP17.7■□□□□ 0.42
VCX3B-201ENST00000381029 ZNF280CQ8ND82 737 aa17.7■□□□□ 0.42
VCX3B-201ENST00000381029 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
VCX3B-201ENST00000381029 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.7■□□□□ 0.42
VCX3B-201ENST00000381029 ZCCHC17Q9NP64 241 aaKnown RBP17.7■□□□□ 0.42
VCX3B-201ENST00000381029 CAPN15O75808 1086 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 FGAP02671 866 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 AKR1B1P15121 316 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 RASA1P20936 1047 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 SPP2Q13103 211 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 ABCB5Q2M3G0 1257 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
VCX3B-201ENST00000381029 SIAH1Q8IUQ4 282 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 BEGAINQ9BUH8 593 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 PRDM10Q9NQV6 1147 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 ADGRA2Q96PE1 1338 aa17.69■□□□□ 0.42
VCX3B-201ENST00000381029 GREB1LQ9C091 1923 aaPredicted RBP17.68■□□□□ 0.42
VCX3B-201ENST00000381029 TRIM75PA6NK02 468 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 ALDH1A1P00352 501 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 APPP05067 770 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 FGRP09769 529 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 TDO2P48775 406 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 BMP2KLQ5H9B9 411 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 ANKRD23Q86SG2 305 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 TNS4Q8IZW8 715 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 NAPBQ9H115 298 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 DIAPH3Q9NSV4 1193 aa17.68■□□□□ 0.42
VCX3B-201ENST00000381029 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.68■□□□□ 0.42
VCX3B-201ENST00000381029 LOC285556D6RIA3 1793 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 MINDY4BA8MYZ0 360 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 TBC1D8O95759 1140 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 BACE1P56817 501 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 PPARAQ07869 468 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 CRHR2Q13324 411 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 DGKZQ13574 1117 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 SEPT2Q15019 361 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 AMOTL1Q8IY63 956 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 CCDC17Q96LX7 622 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 NBPF3Q9H094 633 aa17.67■□□□□ 0.42
VCX3B-201ENST00000381029 A0A1W2PRG0 241 aa17.66■□□□□ 0.42
VCX3B-201ENST00000381029 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
VCX3B-201ENST00000381029 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
VCX3B-201ENST00000381029 AS3MTQ9HBK9 375 aa17.66■□□□□ 0.42
VCX3B-201ENST00000381029 RAD50Q92878 1312 aa17.66■□□□□ 0.42
VCX3B-201ENST00000381029 IGKV6D-41A0A0C4DH26 115 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 SGSM2O43147 1006 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 HMGCS2P54868 508 aa17.65■□□□□ 0.42
VCX3B-201ENST00000381029 MTMR2Q13614 643 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms