RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 SERPINB13Q9UIV8 391 aa28.84■■■□□ 2.21
CDKN2A-203ENST00000380151 BRCA2P51587 3418 aa28.84■■■□□ 2.21
CDKN2A-203ENST00000380151 RBBP6Q7Z6E9 1792 aaKnown RBP28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 MYCP01106 439 aaPredicted RBP28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 FCGRTP55899 365 aa28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 SLFNL1Q499Z3 407 aa28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 SH3D19Q5HYK7 790 aa28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 LCORLQ8N3X6 602 aa28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 CRNKL1Q9BZJ0 848 aaKnown RBP28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 EHD4Q9H223 541 aa28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 MYPNQ86TC9 1320 aa28.83■■■□□ 2.21
CDKN2A-203ENST00000380151 HOXD10P28358 340 aa28.82■■■□□ 2.2
CDKN2A-203ENST00000380151 RRP1P56182 461 aaKnown RBP28.82■■■□□ 2.2
CDKN2A-203ENST00000380151 TTC6Q86TZ1 520 aa28.82■■■□□ 2.2
CDKN2A-203ENST00000380151 GINM1Q9NU53 330 aa28.82■■■□□ 2.2
CDKN2A-203ENST00000380151 KIAA0100Q14667 2235 aaKnown RBP28.81■■■□□ 2.2
CDKN2A-203ENST00000380151 GH2P01242 217 aa28.81■■■□□ 2.2
CDKN2A-203ENST00000380151 BACE1P56817 501 aa28.81■■■□□ 2.2
CDKN2A-203ENST00000380151 ANKRD13CQ8N6S4 541 aa28.81■■■□□ 2.2
CDKN2A-203ENST00000380151 RAET1EQ8TD07 263 aa28.81■■■□□ 2.2
CDKN2A-203ENST00000380151 YTHDC1Q96MU7 727 aaKnown RBP28.81■■■□□ 2.2
CDKN2A-203ENST00000380151 DCTPP1Q9H773 170 aa28.81■■■□□ 2.2
CDKN2A-203ENST00000380151 ADD2P35612 726 aa28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 PLCD1P51178 756 aa28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 PRKCZQ05513 592 aa28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 PABPC4Q13310 644 aaKnown RBP eCLIP28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 TATDN1Q6P1N9 297 aa28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 SDR42E1Q8WUS8 393 aa28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 ARMT1Q9H993 441 aa28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 PDE4DIPQ5VU43 2346 aa28.8■■■□□ 2.2
CDKN2A-203ENST00000380151 MGAMO43451 1857 aa28.79■■■□□ 2.2
CDKN2A-203ENST00000380151 CHGBP05060 677 aa28.79■■■□□ 2.2
CDKN2A-203ENST00000380151 POLR3DP05423 398 aaPredicted RBP28.79■■■□□ 2.2
CDKN2A-203ENST00000380151 TMEM106CQ9BVX2 250 aa28.79■■■□□ 2.2
CDKN2A-203ENST00000380151 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.79■■■□□ 2.2
CDKN2A-203ENST00000380151 ASCC2Q9H1I8 757 aaPredicted RBP28.79■■■□□ 2.2
CDKN2A-203ENST00000380151 TMOD4Q9NZQ9 345 aa28.79■■■□□ 2.2
CDKN2A-203ENST00000380151 MBD4O95243 580 aa28.78■■■□□ 2.2
CDKN2A-203ENST00000380151 EN2P19622 333 aaPredicted RBP28.78■■■□□ 2.2
CDKN2A-203ENST00000380151 EVX2Q03828 476 aa28.78■■■□□ 2.2
CDKN2A-203ENST00000380151 MCM9Q9NXL9 1143 aa28.78■■■□□ 2.2
CDKN2A-203ENST00000380151 PCDHB15Q9Y5E8 787 aa28.78■■■□□ 2.2
CDKN2A-203ENST00000380151 USP17L10C9JJH3 530 aa28.77■■■□□ 2.2
CDKN2A-203ENST00000380151 SHMT1P34896 483 aa28.77■■■□□ 2.2
CDKN2A-203ENST00000380151 FAM110CQ1W6H9 321 aa28.77■■■□□ 2.2
CDKN2A-203ENST00000380151 DCP1AQ9NPI6 582 aaPredicted RBP28.77■■■□□ 2.2
CDKN2A-203ENST00000380151 ECHDC1Q9NTX5 307 aa28.77■■■□□ 2.2
CDKN2A-203ENST00000380151 GABRQQ9UN88 632 aa28.77■■■□□ 2.2
CDKN2A-203ENST00000380151 TNPO2O14787 897 aaKnown RBP28.76■■■□□ 2.19
CDKN2A-203ENST00000380151 GRK4P32298 578 aa28.76■■■□□ 2.19
CDKN2A-203ENST00000380151 CERKLQ49MI3 558 aaPredicted RBP28.76■■■□□ 2.19
CDKN2A-203ENST00000380151 TSHZ3Q63HK5 1081 aa28.76■■■□□ 2.19
CDKN2A-203ENST00000380151 MKI67P46013 3256 aaKnown RBP28.75■■■□□ 2.19
CDKN2A-203ENST00000380151 C19orf81C9J6K1 198 aa28.75■■■□□ 2.19
CDKN2A-203ENST00000380151 CYP2D6P10635 497 aa28.75■■■□□ 2.19
CDKN2A-203ENST00000380151 GCLCP48506 637 aaPredicted RBP28.75■■■□□ 2.19
CDKN2A-203ENST00000380151 IRX3P78415 501 aaPredicted RBP28.75■■■□□ 2.19
CDKN2A-203ENST00000380151 RAB3GAP1Q15042 981 aa28.75■■■□□ 2.19
CDKN2A-203ENST00000380151 ABCB5Q2M3G0 1257 aa28.75■■■□□ 2.19
CDKN2A-203ENST00000380151 PRKAB2O43741 272 aa28.74■■■□□ 2.19
CDKN2A-203ENST00000380151 GABPAQ06546 454 aa28.74■■■□□ 2.19
CDKN2A-203ENST00000380151 FEZ1Q99689 392 aa28.74■■■□□ 2.19
CDKN2A-203ENST00000380151 MYH7P12883 1935 aa28.74■■■□□ 2.19
CDKN2A-203ENST00000380151 UBE3CQ15386 1083 aa28.73■■■□□ 2.19
CDKN2A-203ENST00000380151 ZYXQ15942 572 aaKnown RBP28.73■■■□□ 2.19
CDKN2A-203ENST00000380151 GPATCH3Q96I76 525 aa28.73■■■□□ 2.19
CDKN2A-203ENST00000380151 EMILIN3Q9NT22 766 aa28.73■■■□□ 2.19
CDKN2A-203ENST00000380151 HOXA7P31268 230 aaPredicted RBP28.72■■■□□ 2.19
CDKN2A-203ENST00000380151 FLT3LGP49771 235 aa28.72■■■□□ 2.19
CDKN2A-203ENST00000380151 MTFR1Q15390 333 aa28.72■■■□□ 2.19
CDKN2A-203ENST00000380151 USP17L2Q6R6M4 530 aa28.71■■■□□ 2.19
CDKN2A-203ENST00000380151 SLC44A5Q8NCS7 719 aa28.71■■■□□ 2.19
CDKN2A-203ENST00000380151 CRBNQ96SW2 442 aa28.71■■■□□ 2.19
CDKN2A-203ENST00000380151 CABP5Q9NP86 173 aa28.71■■■□□ 2.19
CDKN2A-203ENST00000380151 BIN2Q9UBW5 565 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-203ENST00000380151 ZSCAN25Q6NSZ9 544 aa28.7■■■□□ 2.18
CDKN2A-203ENST00000380151 SLAIN1Q8ND83 568 aa28.7■■■□□ 2.18
CDKN2A-203ENST00000380151 P2RX7Q99572 595 aaKnown RBP28.7■■■□□ 2.18
CDKN2A-203ENST00000380151 GUCY1A2P33402 732 aa28.69■■■□□ 2.18
CDKN2A-203ENST00000380151 HERVK_113P62684 666 aa28.69■■■□□ 2.18
CDKN2A-203ENST00000380151 ACER1Q8TDN7 264 aa28.69■■■□□ 2.18
CDKN2A-203ENST00000380151 COA7Q96BR5 231 aa28.69■■■□□ 2.18
CDKN2A-203ENST00000380151 ATP8A2Q9NTI2 1148 aa28.69■■■□□ 2.18
CDKN2A-203ENST00000380151 ADCY3O60266 1144 aa28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 PEX10O60683 326 aa28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 SEPT2Q15019 361 aa28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 DYNLL2Q96FJ2 89 aa28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 C12orf42Q96LP6 360 aa28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 PUS7LQ9H0K6 701 aaKnown RBP28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 MORF4L1Q9UBU8 362 aa28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 TAOK2Q9UL54 1235 aa28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 BAZ2AQ9UIF9 1905 aaKnown RBP28.68■■■□□ 2.18
CDKN2A-203ENST00000380151 MPHOSPH10O00566 681 aaKnown RBP28.67■■■□□ 2.18
CDKN2A-203ENST00000380151 ELNP15502 786 aa28.67■■■□□ 2.18
CDKN2A-203ENST00000380151 PRPF38BQ5VTL8 546 aaKnown RBP28.67■■■□□ 2.18
CDKN2A-203ENST00000380151 KBTBD3Q8NAB2 608 aa28.67■■■□□ 2.18
CDKN2A-203ENST00000380151 TXNRD2Q9NNW7 524 aa28.67■■■□□ 2.18
CDKN2A-203ENST00000380151 SLC4A4Q9Y6R1 1079 aa28.67■■■□□ 2.18
CDKN2A-203ENST00000380151 CYP2D7A0A087X1C5 515 aa28.66■■■□□ 2.18
CDKN2A-203ENST00000380151 SMIM22K7EJ46 135 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms