RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 SCRN1Q12765 414 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 SART3Q15020 963 aaKnown RBP14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 TMEM67Q5HYA8 995 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 APOA5Q6Q788 366 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 IQCA1Q86XH1 822 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 CCDC83Q8IWF9 413 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 ENAHQ8N8S7 591 aaPredicted RBP14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 ZSCAN10Q96SZ4 725 aaPredicted RBP14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 RNF181Q9P0P0 153 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 SWAP70Q9UH65 585 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 CNOT7Q9UIV1 285 aaKnown RBP14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 SERPINB13Q9UIV8 391 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 HPS5Q9UPZ3 1129 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 GJA3Q9Y6H8 435 aa14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 ZC3H4Q9UPT8 1303 aaKnown RBP14.09□□□□□ -0.15
EXOSC9-202ENST00000379663 WDR90Q96KV7 1748 aa14.08□□□□□ -0.15
EXOSC9-202ENST00000379663 KLF18A0A0U1RQI7 1052 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 HLA-DOAP06340 250 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 RCAN1P53805 252 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 NBPF9Q3BBW0 867 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 FAM83AQ86UY5 434 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 NECAB1Q8N987 351 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 ZKSCAN3Q9BRR0 538 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 UBAC1Q9BSL1 405 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 DNAJC18Q9H819 358 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 GPRC5DQ9NZD1 345 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 TMOD2Q9NZR1 351 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 PAPPA2Q9BXP8 1791 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 DOCK1Q14185 1865 aa14.08□□□□□ -0.16
EXOSC9-202ENST00000379663 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 MYO1BO43795 1136 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 SHMT1P34896 483 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 TCP10Q12799 353 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 WTAPQ15007 396 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 FAM151AQ8WW52 585 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 MKNK2Q9HBH9 465 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 PI4KBQ9UBF8 816 aa14.07□□□□□ -0.16
EXOSC9-202ENST00000379663 CLRN2A0PK11 232 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 ERICH2A1L162 156 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 GOLGA8BA8MQT2 603 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 NOVP48745 357 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 STK3Q13188 491 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 RCSD1Q6JBY9 416 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 ANKS1AQ92625 1134 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 CHMP5Q9NZZ3 219 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 PGAP2Q9UHJ9 254 aa14.06□□□□□ -0.16
EXOSC9-202ENST00000379663 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 TFAP4Q01664 338 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 KIF4BQ2VIQ3 1234 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 SAMD7Q7Z3H4 446 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 ZNF444Q8N0Y2 327 aaPredicted RBP14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 NEDD1Q8NHV4 660 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 SMARCC2Q8TAQ2 1214 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 LLPHQ9BRT6 129 aaKnown RBP14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 IGKV6D-41A0A0C4DH26 115 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 CCDC69A6NI79 296 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 TCP10L2B9ZVM9 353 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 NMT2O60551 498 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 CTDNEP1O95476 244 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 GPR162Q16538 588 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 TATDN1Q6P1N9 297 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 DGKHQ86XP1 1220 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 FOXP4Q8IVH2 680 aaPredicted RBP14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 NSUN7Q8NE18 718 aaKnown RBP14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
EXOSC9-202ENST00000379663 OTOFQ9HC10 1997 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 PHIPQ8WWQ0 1821 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 BAZ2BQ9UIF8 2168 aaKnown RBP14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 H7C1D1 291 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 ZBTB43O43298 467 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 CCT2P78371 535 aaKnown RBP14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 TBC1D10BQ4KMP7 808 aaPredicted RBP14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 ZNF654Q8IZM8 581 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 CHMP4CQ96CF2 233 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 CSRNP1Q96S65 589 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 VEZTQ9HBM0 779 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 NCOA5Q9HCD5 579 aaKnown RBP14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 SMC3Q9UQE7 1217 aa14.04□□□□□ -0.16
EXOSC9-202ENST00000379663 DDNO94850 711 aaPredicted RBP14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 GJB2P29033 226 aa14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 TROAPQ12815 778 aa14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 TNFAIP1Q13829 316 aa14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 NFXL1Q6ZNB6 911 aa14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 MICU3Q86XE3 530 aa14.03□□□□□ -0.16
EXOSC9-202ENST00000379663 ZSCAN29Q8IWY8 852 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms